Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 1e-15 >seq3 Length=630259 Score = 96.9 bits (106), Expect = 1e-15 Identities = 214/314 (68%), Gaps = 13/314 (4%) Strand=Plus/Minus Query 31488 CGTTCAACACCACTTCGGTTGTGTAGCGATCA---CCACCGTCGGAGTGCTGCCACTTGC 31544 |||| | ||| |||||||| ||||| || || ||||| | || | |||||| || | Sbjct 51125 CGTTAACCACGACTTCGGTGGTGTAACGCTCCTGGCCACCCT--GA-TCCTGCCATTTAC 51069 Query 31545 GGGTTTGCAGCTTGCCCTCGATGTAAACCTTCGATCCCTTTTTCAGGTATT-GCTCGCAA 31603 |||| |||||| ||| ||||| || |||| |||||| ||||||||||||| | ||| | Sbjct 51068 GGGTGCGCAGCTGGCCTTCGATATAGACCTGCGATCCTTTTTTCAGGTATTCACCCGCGA 51009 Query 31604 ACCTTGA-CGAGACCTTCGGTGAAGACGACGACGCTATGCCACTCGGTGCGCTCCTTGCG 31662 ||| | | || || | || | || || | |||||||| ||| ||| ||| Sbjct 51008 --CTTCAGCCAG---TTTGCCAAACAGCACCACACGGTGCCACTCAGTGATCTCTTTGTT 50954 Query 31663 GTCGCCGCTGTCGCGGTCGCGCCAGCTTTCGGAAGTCGCAAGGCGAAGGCTGGCGATGCT 31722 || ||| | | ||||||||||||||| || || || || || | |||| | Sbjct 50953 TTCACCGGTCTGCTTGTCGCGCCAGCTTTCCGACGTAGCCAGCGTAATGTTGGCAACAGC 50894 Query 31723 ACCCCCGGCTTGTGTCTTTCGGATTTCCGGATCGGCGCCGAGATGGCCGATAAGAATGAC 31782 || || | | | | || | ||||||||| || |||| |||| |||||| || Sbjct 50893 GCCACCATTTGGCATATAACGTACTTCCGGATCCTGACCCAGATTCCCGACAAGAATCAC 50834 Query 31783 TTTGTTGACGCTAC 31796 |||||| |||| || Sbjct 50833 TTTGTTAACGCCAC 50820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169791957344592