Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_021561.1 Length=37324 Score E Sequences producing significant alignments: (Bits) Value seq9 87.8 4e-13 >seq9 Length=205880 Score = 87.8 bits (96), Expect = 4e-13 Identities = 135/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 24780 TGAAGATATAAACGCTGATGCCATTGTTATTGAGCAAAACCAAGGCGGTGATATGTGCGA 24839 ||||||| ||||||| ||||| || ||||| ||||| ||||| || ||| ||| Sbjct 5946 TGAAGATCACCACGCTGAAGCCATCGTCATTGAAACCAACCAGGGCGGCGACATGGCCGA 5887 Query 24840 -GACTACGCTGCGCAACGCTGGTTATCAAGGGCGCATTATTCGAGTTACAGCCCGTAAAG 24898 ||| ||||||||||| || || || | ||||| || | || || ||| |||| | Sbjct 5886 AGAC-ACGCTGCGCAATGCGGGCTACCGCGGGCGGATCGTCCGCGTCCATGCCAGTAAGG 5828 Query 24899 GTAAGGCGGTCCGAGCTGAACCCGTAGCGGCGCTGTATGAGCAAGGGCAAGTGTCACATA 24958 | ||| | ||| ||||| ||| | | |||||||||||||| || | ||| | || Sbjct 5827 GCAAGTTTGCCCGGGCTGAGCCCATTTCAGCGCTGTATGAGCAGGGCCGGGTGGCGCACC 5768 Query 24959 GCGGCAACCT 24968 | |||||||| Sbjct 5767 GTGGCAACCT 5758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119306175967708