Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 7e-14 seq33 82.4 4e-11 >seq2 Length=722220 Score = 91.5 bits (100), Expect = 7e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 63031 CCTTAGCTCAGTTGGATAGAGCAGTAGCCTTCTAAGCTATTGGTCACTGGTTCGAATCCA 63090 ||||||||||||||||||||||| ||||||||||| | |||||| ||||||||||| Sbjct 220816 CCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCGAATCCT 220875 Query 63091 GTAGGGTGTACCA 63103 |||||| |||||| Sbjct 220876 GTAGGGCGTACCA 220888 Score = 87.8 bits (96), Expect = 8e-13 Identities = 61/68 (90%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 63113 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCT-TATAGCTGTACGAGTTC 63171 |||||||||||||||||||||||||||||||||||||||||| || ||||| || |||| Sbjct 611108 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTGTAAGGCTGTGCGGGTTC 611167 Query 63172 GAGTCTCG 63179 |||| || Sbjct 611168 AAGTCCCG 611175 >seq33 Length=114970 Score = 82.4 bits (90), Expect = 4e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 8030 TGATTCTTCCTCGTTCAGGTCTGGGCCATAAGCATGGTGTAGTGCTTGGGAACCTTACTG 8089 |||| || || || ||||| || |||||||| ||||| | ||||| || ||||| | Sbjct 72947 TGATCCTGCCGCGCTCAGGCCTTGGCCATAAACATGGCATCGTGCTGGGCAACCTGGTGG 73006 Query 8090 GTCTGATTGATTCAGACTATCAGGGTGAACTTATGGTAAGCCTCTGGAATCGC 8142 |||||||||| || ||||||||||| | || ||||| ||||||||||| Sbjct 73007 GTCTGATTGACTCCGACTATCAGGGACAGCTGATGGTCTCGGTCTGGAATCGC 73059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230570901192931