Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq168 118 9e-22 >seq168 Length=43518 Score = 118 bits (130), Expect = 9e-22 Identities = 279/408 (68%), Gaps = 15/408 (4%) Strand=Plus/Minus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAG-CGT-GCCGTGAT 34261 || ||||| || || |||||||| |||| || || | | | ||| | ||| |||| | | Sbjct 10930 GGGGGGTTCTTAAGGATGAAGGTCGTGAGTTTGTG-GCGCA-TGTCGACGTTGCCGCGCT 10873 Query 34262 AACCGCATGCTTTGCAGCCCTGACAGATAATG--TTCTTTTTAGCGGACACGATGAGCTC 34319 ||||| || |||||| | || || ||| ||| | || | || ||||||||| Sbjct 10872 TGCCGCAGGCCTTGCAGTC---ACGGAGGATGAATTCGTCTTTGGTGAT--GATGAGCTC 10818 Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379 || || ||||| | || || |||| ||| |||||| |||||| | || |||| Sbjct 10817 CGTTTCGGGGTTCTTGCACGACGCGCACAGCACGAACTTGTCGATGAAGACGTCGAGCAA 10758 Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439 ||| | | | | ||||| | ||| ||||||||| | |||||| | | | | Sbjct 10757 GTCACGCAGACGATTCGTCTCGTGCGCGCCATTGACGATGTAGCGTTCGGTCTCATCGTT 10698 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG 34499 || || || ||||| || |||||||| ||| |||| |||||||| | ||| || Sbjct 10697 GAAGGTCGCCTGGGCGCCGAGTTCGCACCCAAAGAACTTGGTCGGGTACGACGACGGGCG 10638 Query 34500 -TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 | |||| || |||| || | ||||||| | |||||||||||||||||||| Sbjct 10637 ATTCAAG-GCTCGCGCGACATCAGCCATGTTGGGAAACACAGTCTTGATGCCGTTGCCGC 10579 Query 34559 TTCCTTCGACCTTGGCGCAGATGCGCGG-CATTTTGTAGCGGTAGAAC 34605 || |||| ||||| ||| ||| || ||| ||||||||||||||| Sbjct 10578 GGCCCTCGATCTTGGTCAAGA-GCGAGGGCATCTTGTAGCGGTAGAAC 10532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412809554331917