Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_022343.1 Length=159991 Score E Sequences producing significant alignments: (Bits) Value seq1 158 1e-33 >seq1 Length=970878 Score = 158 bits (174), Expect = 1e-33 Identities = 283/407 (70%), Gaps = 10/407 (2%) Strand=Plus/Minus Query 15050 CTTCCGACCCCCATCATGGCAGGCGTTCGTACTCCTACCCGTCAGTTCAGTTCATGCGTT 15109 || ||||| || |||||| | ||||| || || || || ||||||||||| || || || Sbjct 158673 CTGCCGACGCCAATCATGTCTGGCGTACGCACCCCAACACGTCAGTTCAGCTCCTGTGTG 158614 Query 15110 CTGATCAAAACTGGCGACACGCTGGATTCCATCAACGCAACCGCCAAATCTATCGTAGAC 15169 |||||| | ||||||| ||||| ||||||||||| ||| ||| | || || | Sbjct 158613 CTGATCGAGTGCGGCGACAGCCTGGACTCCATCAACGCCACCTCCAGCGCAATTGTGAAA 158554 Query 15170 TATGTGAGCAAGCGTGCTGGCATCGGATTTGACGTTGGTGCAATTCGCGGTATCGGCAGT 15229 ||||| ||||||| |||||||| | ||| ||| || || | | ||||| Sbjct 158553 TATGTCTCTCAGCGTGCCGGCATCGGTATCAACGCCGGTCGTATCCGTGCGCTGGGCAGC 158494 Query 15230 CCTATCCGGGGCGGAGAGATGGTCCACACTGGTCTG-GTTCCATTCATCAAATAT---CT 15285 || || || ||||| || | |||| || || ||| | || ||| ||| || | Sbjct 158493 CCGATTCGCGGCGGTGAAGCGTTCCATACCGG-CTGTATCCCGTTCTACAAGCATTTCCA 158435 Query 15286 GACCGGGGCACTGAAGTCGTGCTCTCAGGGCGGTATTCGCGGTGGTGCTGCTACAGCTTA 15345 ||||| || ||||||| || ||||||||||| |||| || || || || || ||| Sbjct 158434 GACCGCGG---TGAAGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGCCAC-GCTGT 158379 Query 15346 TAT-CCCGCTGTGGCATTACCAGTTCGACGATGTCGTTGTGTTGAAGAACAACCGTGGTA 15404 | | |||| |||||||| | |||| | | ||| ||||||||||||||||| Sbjct 158378 TCTACCCGATGTGGCATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGTG 158319 Query 15405 CGGAAGAAAACCGCGAGCGCCGTATCGACTATGGTATTCAGATCAAC 15451 |||| ||||||| ||| | || ||||||||| | ||| ||||| Sbjct 158318 TTGAAGGCAACCGCGTGCGTCACATGGACTATGGTGTACAGCTCAAC 158272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511802450883240