Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq1 293 6e-75 seq174 159 9e-35 >seq1 Length=970878 Score = 293 bits (324), Expect = 6e-75 Identities = 653/975 (67%), Gaps = 4/975 (0%) Strand=Plus/Plus Query 21742 TAGCGAGGTCTCTGTTTAACTTCGGTATAAATCCGGCCAATGTACTCGCCCAAAACTCCG 21801 |||||||| | | ||| ||| | ||||| ||||| || || || |||| || || Sbjct 786011 TAGCGAGGACGATTTTTGGTTTCCATGTAAATGCGGCCGATATATTCACCCAGCACGCCA 786070 Query 21802 ATACCAATGAGCTGCACACCACCGAGAAAAAGTATTGATACCAGCAATGATGGATAACCG 21861 || ||||| ||||| || ||||| ||||| || | || ||||| | || || || || Sbjct 786071 ATCCCAATAAGCTGAACGCCACCAAGAAACAGCACGGAAACCAGAATAGAGGGGTAGCCT 786130 Query 21862 CGCACAGGATTCCCGAAT-GCAAGCGTATCAATGATCATCCAGGCACCGTACAGGAAAGC 21920 |||| || || || || |||| | |||| | |||||||||| || || || ||||| Sbjct 786131 GGCACCGGGTTACCAAACAGCAA-CTTATCCAGGATCATCCAGAGTCCATATAGAAAAGC 786189 Query 21921 CAGGCCTGCAACGAACAGGCCAATGTACGTCCACATGCGTAACGGAAATGTTGAGAAGCT 21980 || || || | | || | || | ||| ||||| | |||| || ||||| Sbjct 786190 TAGCGAGGCCACCAGAAAACCCAGATATGACCAGATGCGAAGTGGAACCGTAGAGAATGA 786249 Query 21981 GGTAATCCCTTCAAGCGCCAGGTTCCAGAGCTTCCAGCCATTAAACTTAGTGCTGCCAGC 22040 ||| | || || ||||| || ||||| ||||||||||| || ||| || ||| || Sbjct 786250 GGTCAGTCCCTCCAGCGCAAGATTCCACAGCTTCCAGCCGCCGAATTTACTGTGGCCCGC 786309 Query 22041 AACACGCTCAGCGCGAGCATATTCAACAACATCTGTACTCCCACCAACCCAGCTCAATAC 22100 | ||||||| || ||||||| || | ||| || | || || ||||| |||| | Sbjct 786310 GATCCGCTCAGTACGCACATATTCTACGATATCAGTCTTTCCGCCGACCCAACTCAGAAT 786369 Query 22101 TCCTTTCATGAACAGGTTGCGTTCTGGTAATAATTTAATGTTTTCCACAACTCCGCGAGA 22160 || ||||| || || || || || | | ||||| || || |||||| | || || Sbjct 786370 CCCCTTCATAAAGAGATTCTTCTCGGGCAGCAGCTTAATATTCTCGACAACTTCACGCGA 786429 Query 22161 CATTAGTCGGAAATCGCCGACGTTCTCCTCAATCTTTGGATTGCTTATTTTATTGTGAAG 22220 ||| || |||||||| ||||| ||||| || |||| |||| ||| || | || || || Sbjct 786430 CATCAGCCGGAAATCACCGACATTCTCTTCTATCTGCGGATGGCTGATGCTGTTATGCAG 786489 Query 22221 TTTATAGAACCACTCAGCAGTCATGCGCTTCAGTCTTCCGTCTGTAGAACGGTCTGAGCG 22280 ||| || ||||| || || |||| || || || || | | | ||| || Sbjct 786490 TTTGTAAAACCAGCGGGCGGTTTTGCGTTTGAGGTGGCCATCGGCACTTCTGTCCATCCG 786549 Query 22281 CTTAGCCAGTACCATATCAGCACCTGCCTGCCACTTTTCAATAAGATGAGGGATAACCTC 22340 ||| || || || ||||||||||| ||| ||||||| | || | | ||||||||| Sbjct 786550 CTTGGCAAGAACAATATCAGCACCCGCCAGCCACTTGTTGATCATCTCAGGGATAACAGT 786609 Query 22341 AATCGGGTCCTGCAGATCGACATCAATAGGAATTACAGCATCGCCGCTTGCATGGTCTAA 22400 || |||||||| | ||| |||||||| || || || ||||||||| |||| || | Sbjct 786610 GATGGGGTCCTGTAAATCCACATCAATCGGGATAACGGCATCGCCGGTTGCGGCTTCCAG 786669 Query 22401 CCCTGCAAATAAGGCTGGTTCTTTACCAAAGTTGCGTGTAAATGACAGCGGAACAACTAG 22460 || ||||| | || ||||| || || || || || |||| ||||| || || || Sbjct 786670 GCCGGCAAACAGCGCGGGTTCCTTGCCGAAATTACGAATAAACGACAGGCTAAGTACCAG 786729 Query 22461 CGGGTCTGAAACAGCCAGCGCGTTAATAATTGACTCTGTGGCATCTTTACTTCCGTCATT 22520 ||| || | ||| | |||| | | | || |||||| | || || |||| Sbjct 786730 CGGATCGCTCTGACTCAGTTGGGTAATCAGCGCATGCGTTGCATCTGTGCTGCCATCATC 786789 Query 22521 TATGAATACAATTTCTACTTCATATGGCT-TCAACTCTTGGAATTCACGTACCGTTTTAT 22579 | || ||||| || || | | |||| || | ||| ||| | |||| | || Sbjct 786790 AACAAAAACAATCTCAACCTGCCA-GGCTGCCAGCGCTTCATATTTTCTGACCGCGTCAT 786848 Query 22580 AGAAAACAGGTATCGCTTCTTCTTCATTGAAGACAGGAACGACAAGAGATATTTTCATTT 22639 | |||| ||| || | || |||||||| || || || || || ||||| ||||||||| Sbjct 786849 AAAAAAGAGGGATGACCTCCTCTTCATTAAATACCGGTACCACCAGAGAGATTTTCATTA 786908 Query 22640 CGCATCCCTAAAGACAATGAACTTTGAATAGACGAAACCGCACACCAGACTGATGGCGGA 22699 | | |||| || || || ||| | | || || ||| |||||||||| || || Sbjct 786909 TTCTCCTTTAAATACGATAAAGCGGGAAAAAAGAAAGCCACACGCCAGACTGATAGCCGA 786968 Query 22700 GAAGGTGATAAGAGT 22714 ||||||| || || Sbjct 786969 TGAGGTGATCAGCGT 786983 >seq174 Length=42168 Score = 159 bits (176), Expect = 9e-35 Identities = 256/360 (71%), Gaps = 6/360 (2%) Strand=Plus/Minus Query 29522 TAACCACAG-AACGATGAGGCTAACCGTGGGTAAGCATCACTGGAAAGTAGAAAAACAGC 29580 ||||||||| || || | | ||||||||| | || | |||||| |||||||||| || | Sbjct 34722 TAACCACAGTAAAGAGG-GCTTAACCGTGGATCAGAAGCACTGGCAAGTAGAAAAGCAAC 34664 Query 29581 CTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCAAAGTTGCCGGGTGGTTACGCTG 29640 | | ||| ||| || | | ||| || ||| ||| | |||||||| || || | Sbjct 34663 CAGCATGGCTGGTGGCGGCAATTAAAAAGACCATCTCAAGTCTTCCGGGTGGGTATGCAG 34604 Query 29641 AAGCAGCTGACTGGCTGGATGTAACAGAGAACGCATTATTTAACCGCCTTCGTGCCGATG 29700 |||||||||| ||| ||| || || || | ||||| || ||||| |||||| || ||| Sbjct 34603 AAGCAGCTGAATGGTTGGGCGTGACTGAAGATGCATTGTTCAACCGTCTTCGTACCAATG 34544 Query 29701 GCGATCAGATTTTCCCGCTGGGATGGGCAATGATTTTGCAACGTGCTGGTGGAACTCACT 29760 |||||||||||||||| |||| ||||| ||| | |||||| || | | || | Sbjct 34543 GCGATCAGATTTTCCCAATGGGCTGGGCGATGGTCCTGCAACAGGCAAGCGACACCAAGC 34484 Query 29761 TCATTGCTGACGCTGTGGCGCAGTCTG-CAAATGGCGTCTTTGTGTCTCTTCCTGACGTC 29819 ||| ||| |||| ||| | | || | |||| ||||| || | ||| | | | Sbjct 34483 ACATCGCTAACGCGGTGTC-CCTTCAGTCAAACAGCGTCAACGTTCCGCTTGTGGGCATT 34425 Query 29820 GAGGATGTGGACAACGCCGATATTAACCAGCGTCTGCTGGAAGTCA-TTGAACAGATCGG 29878 |||||||| || ||||| ||||| || ||||| ||| ||| ||||| |||| |||||| Sbjct 34424 GAGGATGTTGATAACGCAGATATCAATCAGCGACTGATGG-AGTCAGTTGAGTGGATCGG 34366 Score = 143 bits (158), Expect = 7e-30 Identities = 210/297 (71%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 34254 GATCCGGAGTCGCCGGACTCTTTTATGTTACGCCCAAAACGTCGCCGCTGGGTTAACGAA 34313 || ||||| || || || || || ||| ||||| || ||| ||||||| | || Sbjct 29515 GACCCGGAATCACCAGAATCATTCATGAAGCGCCCCAAGCGTAAGCGCTGGGAAAGTGAG 29456 Query 34314 AAGTACACGCGTTGGGTTAAGACGCAGCCGTGCGCATGTTGTGGAAAACCTGCTGATGAT 34373 || || || | ||||| || ||||| ||||||||||||| || | ||||| ||| Sbjct 29455 AAATATACAAGATGGGTAAAATCGCAGACGTGCGCATGTTGCGGCGTGCAGGCTGACGAT 29396 Query 34374 CCCCACCACCTGATAGGCCACGGTCAGGGGGGAATGGGTACAAAAGCGCATGACCTCTTT 34433 || || ||| | || || || || |||||||||||||| || || |||||||| | ||| Sbjct 29395 CCTCATCACATCATCGGACATGGACAGGGGGGAATGGGAACGAAGGCGCATGATTTATTT 29336 Query 34434 GTGTTGCCTTTGTGCAGAAAGCATCACGACGAGCTGCATGCGGATACCGTGGCATTTGAA 34493 ||| | || | |||||| ||||||||| || ||||| ||||| || |||||| Sbjct 29335 GTGATACCGCTATGCAGAGCGCATCACGATGAACTGCACCGGGATATGAGAGCGTTTGAA 29276 Query 34494 GAGAAGTATGGCTCTCAGCTGGAGCTGATATTTCGTTTTATCGATCGTGCGCTGGCA 34550 | ||| || ||| |||| | |||||| | || | || |||||| ||| | ||| Sbjct 29275 GCGAAATACGGCAGTCAGATAGAGCTGCTGTTCAGGTTCCTCGATCACGCGATTGCA 29219 Score = 96.9 bits (106), Expect = 9e-16 Identities = 164/232 (71%), Gaps = 13/232 (6%) Strand=Plus/Minus Query 30188 AATGTACCAGGTGAC--AGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGGG 30245 ||||||||||| | | || | || | ||||| ||||||||| || ||||||||||| | Sbjct 34048 AATGTACCAGGCGGCGCAGAGGAAGT-TAACC-ACAGCTTTGTTGACTGGGCTGTGGGCG 33991 Query 30246 ATTTCAACCGGCA---GAAGGAGACAGTCCTTTGCGACAAGTTAATCGCTGGTTCAAAGA 30302 || |||| || ||||| ||| | ||||| || || | ||| ||| ||| Sbjct 33990 ATGCTAACCAGCGAATGAAGGCGAC---CAAATGCGAGAACTTGACCGCATCTTCCGAGA 33934 Query 30303 TCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACGGGTTATCTA 30362 | | ||| | || || | |||||||| |||||||| || | | ||||||||||| Sbjct 33933 TAAGCGCGGCATCCCTGTGCGGGTCATTCGCTGGGAGCCAGAGAACGACCGGGTTATCTA 33874 Query 30363 CCTCCGTGAAGGCTATGAGCAT---GAGTGCTTCAGCCCGCTCGAACAGTTT 30411 ||| ||||| |||||| ||| ||||||||||| | |||||| |||| Sbjct 33873 CCTGCGTGACAACTATGAACATGGCGAGTGCTTCAGTTCTCTCGAAAGGTTT 33822 Score = 80.6 bits (88), Expect = 7e-11 Identities = 79/102 (77%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 39581 GCGAAAACCGTTGACCACATCATCCCTAAAGCGCGTGGCGGCACTGATGCCGACAGTAAT 39640 || || || |||||||||||||| || ||||| | ||| || || |||| |||||| || Sbjct 22939 GCTAAGACGGTTGACCACATCATTCCGAAAGCACATGGGGGTACCGATGACGACAGCAAC 22880 Query 39641 CTACAGAGCCTGTGTTGGCCGTGTCATAAGGCGAAGACGGCC 39682 || ||| |||| |||||||| || ||||| ||||| ||| Sbjct 22879 CTTCAGGCTTTGTGCTGGCCGTGCCACAAGGCAAAGACAGCC 22838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127094386886160