Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_022768.1 Length=154701 Score E Sequences producing significant alignments: (Bits) Value seq1 122 9e-23 >seq1 Length=970878 Score = 122 bits (134), Expect = 9e-23 Identities = 273/406 (67%), Gaps = 8/406 (2%) Strand=Plus/Minus Query 103240 CTTCCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTT 103299 || || || || |||||||| ||||| || |||||||| || || ||||| || ||||| Sbjct 158673 CTGCCGACGCCAATCATGTCTGGCGTACGCACCCCAACACGTCAGTTCAGCTCCTGTGTG 158614 Query 103300 CTTATCAAAACCGGTGACACTTTGGACTCGATCAATGCTACAGCCAAAAGTATTGTTGAT 103359 || ||| | ||| |||| ||||||| ||||| || || ||| ||||| | Sbjct 158613 CTGATCGAGTGCGGCGACAGCCTGGACTCCATCAACGCCACCTCCAGCGCAATTGTGAAA 158554 Query 103360 TATGTATCCAAACGCGCTGGGATCGGATTTGATGTCGGAGCAATTCGTGGCATCGGTAGC 103419 ||||| || | || || || ||||| | | | ||| || |||| | || ||| Sbjct 158553 TATGTCTCTCAGCGTGCCGGCATCGGTATCAACGCCGGTCGTATCCGTGCGCTGGGCAGC 158494 Query 103420 CCTATCCGAAAAGGTGAAATGGTGCACACAGGCCTGGTTCCTTTCATAAAATATCT---G 103476 || || || |||||| | | || || ||| | || ||| || || | | Sbjct 158493 CCGATTCGCGGCGGTGAAGCGTTCCATACCGGCTGTATCCCGTTCTACAAGCATTTCCAG 158434 Query 103477 ACTGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGCAACT-TGCTA 103535 || | || | ||||| || ||||| ||||| |||||||||| |||| || || | Sbjct 158433 ACCGCGG---TGAAGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGCCACGCTGTTC 158377 Query 103536 TATCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTCT 103595 || ||| || |||||| || | || | |||| |||||||||||||||||| | Sbjct 158376 TA-CCCGATGTGGCATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGTGT 158318 Query 103596 TGAAGAGAACCGTGAACGCCGTATCGACTATGGTATTCAGATCAAC 103641 ||||| ||||| | || | || ||||||||| | ||| ||||| Sbjct 158317 TGAAGGCAACCGCGTGCGTCACATGGACTATGGTGTACAGCTCAAC 158272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494875798563640