Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_022772.1 Length=156338 Score E Sequences producing significant alignments: (Bits) Value seq1 122 9e-23 >seq1 Length=970878 Score = 122 bits (134), Expect = 9e-23 Identities = 275/407 (68%), Gaps = 10/407 (2%) Strand=Plus/Minus Query 104945 CTTCCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTT 105004 || || || || |||||||| ||||| || |||||||| || || ||||| || ||||| Sbjct 158673 CTGCCGACGCCAATCATGTCTGGCGTACGCACCCCAACACGTCAGTTCAGCTCCTGTGTG 158614 Query 105005 CTTATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGAT 105064 || ||| | ||| |||| ||||||| ||||| || || ||| ||||| | Sbjct 158613 CTGATCGAGTGCGGCGACAGCCTGGACTCCATCAACGCCACCTCCAGCGCAATTGTGAAA 158554 Query 105065 TATGTATCCAAACGCGCTGGGATCGGATTTGATGTCGGAGCAATTCGTGGCATCGGTAGC 105124 ||||| || | || || || ||||| | | | ||| || |||| | || ||| Sbjct 158553 TATGTCTCTCAGCGTGCCGGCATCGGTATCAACGCCGGTCGTATCCGTGCGCTGGGCAGC 158494 Query 105125 CCTATCCGAAAAGGTGAAATGGTGCACACAGGTCTGGTTCCTTTCATAAAAT-ATCT--- 105180 || || || |||||| | | || || || ||| ||| | || || || | Sbjct 158493 CCGATTCGCGGCGGTGAAGCGTTCCATACCGG-CTGTATCCCGTTCTACAAGCATTTCCA 158435 Query 105181 GACTGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGCAACT-TGCT 105239 ||| | || | ||||| || ||||| ||||| |||||||||| |||| || || | Sbjct 158434 GACCGCGG---TGAAGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGCCACGCTGTT 158378 Query 105240 ATATCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTC 105299 || ||| || |||||| || | || | |||| |||||||||||||||||| Sbjct 158377 CTA-CCCGATGTGGCATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGTG 158319 Query 105300 TTGAAGAGAACCGTGAACGCCGTATCGACTATGGTATTCAGATCAAC 105346 |||||| ||||| | || | || ||||||||| | ||| ||||| Sbjct 158318 TTGAAGGCAACCGCGTGCGTCACATGGACTATGGTGTACAGCTCAAC 158272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500113781521520