Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_022976.1 Length=75894 Score E Sequences producing significant alignments: (Bits) Value seq4 113 2e-20 >seq4 Length=447486 Score = 113 bits (124), Expect = 2e-20 Identities = 412/632 (65%), Gaps = 20/632 (3%) Strand=Plus/Minus Query 66241 GCCTACATCGACGCTGAGCACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGAC 66300 |||| ||||| || || || | || || || | ||||||||| ||||| || ||| Sbjct 25767 GCCTTTATCGATGCAGAACATGCGCTTGATCCGGTTTACGCCAAGAAACTCGGCGTAGAC 25708 Query 66301 CTCGACAACCTCGTGGTGGT-TCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 66359 | || ||||| | || | |||||| |||||||| |||||||| ||||| ||| ||| Sbjct 25707 ATTGATAACCTGCTC-TGCTCTCAGCCTGACACTGGTGAGCAGGCGCTGGAAATCTGTGA 25649 Query 66360 CCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGT 66419 || | ||||| | | | | || |||| ||||| || ||||| ||| Sbjct 25648 TGCGCTGGCGCGCTCTGGTGCCGTTGACGTGATCATCGTCGACTCCGTCGCGGCGCTGAC 25589 Query 66420 GCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCT 66479 ||| || || ||||||| || ||||| ||| ||| | ||||| || || | Sbjct 25588 GCCTAAAGCGGAAATCGAAGGTGAAATCGGTGACTCACACATGGGCCTCGCGGCACGTAT 25529 Query 66480 CATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCA--CCAACACGCTGACG 66537 ||| ||||| ||||| || || |||| | | || |||| |||| || ||| | Sbjct 25528 GATGAGCCAGGCGATGCGTAAACTGGCCGGTAAC--CTGAAGCAGTCCAATACCCTGCTG 25471 Query 66538 CTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA--ACGTGGGCTACGGCCCGAATGAGA 66595 | | |||||||| | || ||| || || | || | || |||| || | Sbjct 25470 ATTTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTTGGTAA--CCCG---GAAA 25416 Query 66596 CCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCA 66655 ||||||| || || || || ||| |||||||||||| || || | ||| |||| || | Sbjct 25415 CCACCACTGGTGGTAACGCGCTGAAGTTCTACGCCTCTGTTCGTCTTGATATCCGCCGTA 25356 Query 66656 TCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCA 66715 ||| | || || |||||| | | ||||||| ||||| || ||||| || | Sbjct 25355 TCGGTGCAATCAAAGAGGGCGATAACGTGGTCGGCAGTGAGACCCGCGTTAAAGTGGTGA 25296 Query 66716 AGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCA 66775 | ||||| | ||| |||| | | || |||||| || ||||||| || || | Sbjct 25295 AAAACAAAATCGCCGCGCCATTCAAACAGGCTGAGTTCCAGATCATGTACGGCGAAGGTA 25236 Query 66776 TC-TCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTG-GTGAAGAAGTC 66833 || | | ||| || || ||||||||| |||| ||| ||| |||| ||| | Sbjct 25235 TCAATACCTTTGGT-GAGCTGGTCGACCTGGGCGTGAAGCACAAGCTGATTGAAAAAG-C 25178 Query 66834 GGGCGCCTGGTTCAAGTAC---GGGGACAAGA 66862 ||| || |||| || ||| || ||||||| Sbjct 25177 GGGTGCATGGTACAGCTACAATGGCGACAAGA 25146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242717158300695