Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq1 675 0.0 >seq1 Length=970878 Score = 675 bits (748), Expect = 0.0 Identities = 824/1116 (74%), Gaps = 21/1116 (2%) Strand=Plus/Minus Query 71290 AAAAACGATCAGATGGCTGAACCGATGTTCCTGGGTCAGTCGGTTAACGTCTCACGTTAT 71349 ||||| |||||| || || |||||||| | |||||||| || ||||| | || | Sbjct 156906 AAAAATGATCAGCTGAAAGAGCCGATGTTTTTCGGTCAGTCCGTAAACGTGGCGCGCTTC 156847 Query 71350 GATCAGCAGAAGTACCCCGCGTTCGAAAAGCTGATTGAGAAACAACTTTCATTCTTCTGG 71409 || ||||| || || | || ||||||||||| || || || || || ||||||||| Sbjct 156846 GACCAGCAAAAATATGACATCTTTGAAAAGCTGATCGAAAAGCAGCTCTCCTTCTTCTGG 156787 Query 71410 CGACCTGAAGAGGTGGATGTTTCGCAAGACCGTATCGACTTCCAGGGGTTGCCAGATCAT 71469 || || |||||||| || ||||| | || || ||||| | ||||| | |||| |||||| Sbjct 156786 CGTCCGGAAGAGGTCGACGTTTCACGCGATCGCATCGATTACCAGGCGCTGCCGGATCAT 156727 Query 71470 GAAAAACACATCTTCGTTTCTAACCTGAAATACCAAACCCTGCTGGACTCGATTCAGGGT 71529 |||||||| ||||| | |||||||| || || || |||||||| ||||||||||| Sbjct 156726 GAAAAACATATCTTTATCAGCAACCTGAAGTATCAGACGCTGCTGGATTCGATTCAGGGC 156667 Query 71530 CGTAGCCCGAACGTGGCCTTGCTGCCGATCTGTTCT--ATCCCGGAACTCGAAACCTGGA 71587 || ||||||||||| || |||||||| ||| ||| || || ||||| |||||||||| Sbjct 156666 CGCAGCCCGAACGTCGCGCTGCTGCCG--CTGATCTCGATTCCTGAACTGGAAACCTGGA 156609 Query 71588 TTGAAACCTGGGCGTTCTCTGAAACGATTCACTCGCGCTCATACACCCACATCATCCGTA 71647 ||||||||||||||||||| || ||||||||||| || || ||||||||||||||||||| Sbjct 156608 TTGAAACCTGGGCGTTCTCAGAGACGATTCACTCCCGTTCTTACACCCACATCATCCGTA 156549 Query 71648 ATATCTTTACTGACCCCTCCATCGTGTTTGATGACATCGTGACCAACGAACACATCAAAG 71707 | || ||| || || | | || ||||| || ||||| ||||| || || || | Sbjct 156548 ACATTGTTAACGATCCGGCGGTAGTTTTTGACGATATCGTTACCAATGAGCAGATTCTGG 156489 Query 71708 CGCGTGCTGAG--TCCGTCACGGAGTATTACGACCAGCTGATCGAAATGACCATGTACCT 71765 |||||||| || | ||||| ||||||||| | ||||| || ||||||| ||| Sbjct 156488 CGCGTGCTCAGGATATCTCACGC--TATTACGACGATCTGATTGAGATGACCAACTACTG 156431 Query 71766 CAACTTACTGGGTGAAGGTACTCATGTAATCAATGGTAAGAAAGTCGTGGTCTCGATGCG 71825 | ||||||||||| || ||| |||| || || || || ||| |||| Sbjct 156430 GCATCAGCTGGGTGAAGGCACGCATCAGGTCAACGGCAAACCGGTTGTCGTCAGCCTGCG 156371 Query 71826 TGCTATCAAGCGTCTGGTCTACCTGTGCATCGTGTCGGTCAACGTGTTGGAAGCCATCCG 71885 || | ||| | | |||| | ||| | || ||||| | | ||||||| ||||| Sbjct 156370 CGCCCTGAAGAAGCAGCTCTATATCTGCCTGATGAGCGTCAATGCGCTGGAAGCGATCCG 156311 Query 71886 CTTCTATGTCTCGTTTGCCTGCTCGTTTGCCTTTGCTGAACGCGAGCTGATGGAAGGCAA 71945 ||||||||| || ||||| || || || || ||||| || ||||||||||||||||| Sbjct 156310 TTTCTATGTCAGCTTCGCCTGTTCCTTCGCGTTCGCTGAGCGTGAGCTGATGGAAGGCAA 156251 Query 71946 CGCCAAGATCATTAAACTGATCGCCCGTGATGAAGCCCTGCATCTGACCGGCACCCAGCA 72005 ||||| ||||| || ||||| ||||| |||||||| ||||| ||||||||||||||||| Sbjct 156250 TGCCAAAATCATCAAGCTGATTGCCCGCGATGAAGCGCTGCACCTGACCGGCACCCAGCA 156191 Query 72006 CATGATCATGTTAATGAAGTCCGGTGCTGACGATGCTGAGATGGCGGAAATCGTTAAAGA 72065 |||| | | | || ||||| |||||| | |||||| || || | ||| Sbjct 156190 CATGCTGAACCTGCTGCGCAGCGGTGAAGACGATCCGGAGATGAAAGAGATTGCGGCAGA 156131 Query 72066 GTGTGAAGCAGAAACATACGCACTCTTTAAGGACGCTGCAGAGCAGGAGAAAGACTGGGC 72125 ||| | ||| | || || |||||| | || ||| |||||||||||| ||||| Sbjct 156130 GTGCCGTGAAGAGTGCTTCGAGCTGTTTAAGAAAGCAGCACTGCAGGAGAAAGAGTGGGC 156071 Query 72126 GAACTATCTATTCCAGGACGGGTCGATGATCGGTCTGAACAAAGAGATCGTGTGCCAGTA 72185 | ||||| ||| | ||| || |||||||| ||||||||||| || | |||||||| Sbjct 156070 AGAATATCTGTTCAGCGGCGGCTCAATGATCGGCCTGAACAAAGATATTCTCTGCCAGTA 156011 Query 72186 CATCGAATACATCACCAACATCCGTATTCGCGCCATCGGTTACGATGACATCTACGCCGG 72245 ||| || ||||||||||| |||||||| | || |||| | ||| | ||| | Sbjct 156010 CATTGAGTACATCACCAATATCCGTATGCAGGCTGTCGG---CCTTGA----TTTGCC-G 155959 Query 72246 TGTCAAA---GCT--AACCCAATCCCATGGATCAACTCCTGGTTGGTTTCTGACAACGTG 72300 | || | ||| ||||||||||||||||| ||||||||| |||| ||||||||||| Sbjct 155958 TTCCAGACGCGCTCAAACCCAATCCCATGGATTAACTCCTGGCTGGTCTCTGACAACGTT 155899 Query 72301 CAAGTCGCTCCACAGGAAGTGGAAGTAAGTTCTTATCTGGTCGGTCAGATAGACTCGAAA 72360 || || || || |||||||||||||| || || |||||||| |||||||| || || || Sbjct 155898 CAGGTTGCGCCGCAGGAAGTGGAAGTGAGCTCCTATCTGGTGGGTCAGATCGATTCTGAA 155839 Query 72361 GTGGACGCCAACGATTTCGACGATTTCCAACTGTAA 72396 || | ||| ||||| |||||||| ||||| || ||| Sbjct 155838 GTAGGCGCTAACGACTTCGACGACTTCCAGCTTTAA 155803 Score = 131 bits (144), Expect = 3e-25 Identities = 211/296 (71%), Gaps = 18/296 (6%) Strand=Plus/Plus Query 64474 GATACTCTCGATACCAAGAT-GACACAATGGTACGCGTCACAATGTACTGGTGATGTGAT 64532 ||||| |||||| || || ||| || |||||||| |||| |||| || |||||||| Sbjct 309231 GATACCCTCGATTGTAAAATCGAC-CAGTGGTACGCCTCACGCTGTAGCGGCGATGTGAT 309289 Query 64533 CGTTAACAAAT-GGTCCGATC--GTCAG--GCAGGTGGC---TGGAACCATACCACTGCT 64584 | |||| || | | || ||||| ||||| || ||| |||| | ||| || Sbjct 309290 C------AAATCGGGCTGGTCAGGTCAGAAGCAGG--GCAAATGGGACCACAGCACCGCG 309341 Query 64585 GTTGAAATGACCAACTTTAACATCCAGAAGTGTGTTGGTGGTAAAGTGTTTGACATGCAG 64644 |||| || | |||||||| ||| | ||| |||||| ||||| | || ||| | Sbjct 309342 ATTGAGCTGTCGAACTTTAATGCGCAGTACTGTCGTGGTGGCAAAGTCCTCAACCTGCCG 309401 Query 64645 CGCTGCGCTCAGTCGTTTATCACTAATGGCTGGATCGAGCACTGTGATGATCCAGGCGAC 64704 ||||||| |||||| ||||| ||| |||||||| |||||||||||| | || || || Sbjct 309402 CGCTGCGGCCAGTCGATTATCCATAACGGCTGGATTGAGCACTGTGATAACCCGGGTGAT 309461 Query 64705 CTGTCTAATGGTCAATGGACGGTAAATGGCCTGAGTATCGAAGATTGTAAGAAACC 64760 || || || ||||| |||| || ||| ||||| | || ||||||||||| || Sbjct 309462 CTCTCCAACGGTCAGTGGATTGTCGATGCGCTGAGCCTGGAGGATTGTAAGAATCC 309517 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 165194 TCTATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCGAATCCA 165253 ||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||| |||| Sbjct 378787 TCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCA 378728 Query 165254 GCTAGACCAGCCAAA 165268 | ||| ||||||| Sbjct 378727 GTCAGAGGAGCCAAA 378713 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165194 TCTATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCGAATCCA 165253 ||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||| |||| Sbjct 403728 TCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCA 403669 Query 165254 GCTAGACCAGCCA 165266 | ||| ||||| Sbjct 403668 GTCAGAGGAGCCA 403656 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165194 TCTATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCGAATCCA 165253 ||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||| |||| Sbjct 479469 TCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCA 479410 Query 165254 GCTAGACCAGCCA 165266 | ||| ||||| Sbjct 479409 GTCAGAGGAGCCA 479397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 867271748830560