Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 3e-16 >seq3 Length=630259 Score = 98.7 bits (108), Expect = 3e-16 Identities = 198/291 (68%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 30098 TCTGTTGTGTAGCGGTCCTGACCGTCCTGCGCCTGCCACTTTCGAGTTCTGAGTGAACCC 30157 || || ||||| || ||||| || |||| ||||||| || || || | || || Sbjct 51111 TCGGTGGTGTAACGCTCCTGGCCACCCTGATCCTGCCATTTACGGGTGCGCAGCTGGCCT 51052 Query 30158 TCGACGTACAGTTGCTGACCCTTCTTT-ACGTGCTGCCCGACGATCTCCGCCAACTTCCC 30216 |||| || | ||| || |||| ||| | || | || ||| || |||| || || Sbjct 51051 TCGATATAGACCTGC-GATCCTTTTTTCAGGTATTCACCCGCGACTTCAGCCAGTTTGCC 50993 Query 30217 GAAGAACACCACGCGGTGCCATTCGGTGCGCTCCTGTTGCTGGCCGGTCTGCTTGTCCTT 30276 || | |||||| |||||||| || ||| ||| | | | |||||||||||||| Sbjct 50992 AAACAGCACCACACGGTGCCACTCAGTGATCTCTTTGTTTTCACCGGTCTGCTTGTCGCG 50933 Query 30277 CCAGCTCTCGCTGGTGGCGAGGGTGATGTTGGTCACCGCATTGCCGTTGGGCATATAGCG 30336 |||||| || || || || || ||||||| || || || || |||||||| || Sbjct 50932 CCAGCTTTCCGACGTAGCCAGCGTAATGTTGGCAACAGCGCCACCATTTGGCATATAACG 50873 Query 30337 AGTTTCCGGGTCACCACCGACGTTGCCAACCAGAATGACTTTGTTAACGCC 30387 |||||| || ||| | || || || ||||| |||||||||||||| Sbjct 50872 TACTTCCGGATCCTGACCCAGATTCCCGACAAGAATCACTTTGTTAACGCC 50822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145627385094736