Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 2e-14 >seq4 Length=447486 Score = 93.3 bits (102), Expect = 2e-14 Identities = 156/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 37931 CCTTGTCATACATTGTTCCAGTTCTTTGTAGAGAATGGAAAACTAAGCTGTCAGTTATAT 37990 ||||| || | || |||||||||| || | | | || ||||| ||| ||| | ||| Sbjct 111807 CCTTGCCACGCGTTCTTCCAGTTCTACGTGGCGGACGGCAAACTCTCCTGCCAGCTCTAT 111748 Query 37991 CAACG-TAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTATGCGTTGCT 38049 || || | |||| || ||||| | || | || ||||| || || |||||||||||||| Sbjct 111747 CAGCGCTCGTGC-GACATCTTCCTGGGCCTGCCGTTTAACATCGCCAGCTATGCGTTGCT 111689 Query 38050 TACACATATCGTAGCTGCAGAATGTG-GAT-TAGAAGTTGGTGAATTTGTCTGGACTGGT 38107 |||||| || || |||| | ||| ||| | | || || || || |||||||| || Sbjct 111688 GGTACATATGGTGGC-GCAGCA-GTGCGATCTGCAGGTGGGCGACTTCGTCTGGACCGGC 111631 Query 38108 GGTGTAGTTCACCTGTACAGTAATCACCTTGAGCAAGC 38145 |||| ||||| |||||||| || || ||||| || Sbjct 111630 GGTGATACCCACCTCTACAGTAACCATCTGGAGCAGGC 111593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248790286854577