Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_023689.1 Length=76260 Score E Sequences producing significant alignments: (Bits) Value seq4 109 3e-19 >seq4 Length=447486 Score = 109 bits (120), Expect = 3e-19 Identities = 428/659 (65%), Gaps = 23/659 (3%) Strand=Plus/Minus Query 66331 GCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGAC 66390 |||| ||||| || || || | || || || | ||||||||| ||||| || ||| Sbjct 25767 GCCTTTATCGATGCAGAACATGCGCTTGATCCGGTTTACGCCAAGAAACTCGGCGTAGAC 25708 Query 66391 CTCGACAACCTCGTGGTGGT-TCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 66449 | || ||||| | || | |||||| |||||||| |||||||| ||||| ||| ||| Sbjct 25707 ATTGATAACCTGCTC-TGCTCTCAGCCTGACACTGGTGAGCAGGCGCTGGAAATCTGTGA 25649 Query 66450 CCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGT 66509 || | ||||| | | | | || |||| ||||| || ||||| ||| Sbjct 25648 TGCGCTGGCGCGCTCTGGTGCCGTTGACGTGATCATCGTCGACTCCGTCGCGGCGCTGAC 25589 Query 66510 GCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCT 66569 ||| || || ||||||| || ||||| ||| ||| | ||||| || || | Sbjct 25588 GCCTAAAGCGGAAATCGAAGGTGAAATCGGTGACTCACACATGGGCCTCGCGGCACGTAT 25529 Query 66570 CATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCA--CCAACACGCTGACG 66627 ||| ||||| ||||| || || |||| | | || |||| |||| || ||| | Sbjct 25528 GATGAGCCAGGCGATGCGTAAACTGGCCGGTAAC--CTGAAGCAGTCCAATACCCTGCTG 25471 Query 66628 CTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA--ACGTGGGCTACGGCCCGAACGAGA 66685 | | |||||||| | || ||| || || | || | || |||| || | Sbjct 25470 ATTTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTTGGTAA--CCCG---GAAA 25416 Query 66686 CCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCA 66745 ||||||| || || || || ||| |||||||||||| || || | ||| |||| || | Sbjct 25415 CCACCACTGGTGGTAACGCGCTGAAGTTCTACGCCTCTGTTCGTCTTGATATCCGCCGTA 25356 Query 66746 TCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCA 66805 ||| | || || |||||| | | ||||||| ||||| || || || || | Sbjct 25355 TCGGTGCAATCAAAGAGGGCGATAACGTGGTCGGCAGTGAGACCCGCGTTAAAGTGGTGA 25296 Query 66806 AGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCA 66865 | ||||| | ||| |||| | | || |||||| || ||||||| || || | Sbjct 25295 AAAACAAAATCGCCGCGCCATTCAAACAGGCTGAGTTCCAGATCATGTACGGCGAAGGTA 25236 Query 66866 TC-TCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTG-GTGAAGAAGTC 66923 || | | ||| || || ||||||||| |||| ||| ||| |||| ||| | Sbjct 25235 TCAATACCTTTGGT-GAGCTGGTCGACCTGGGCGTGAAGCACAAGCTGATTGAAAAAG-C 25178 Query 66924 GGGCGCCTGGTTCAAGTAC---GGGGACAAGAACGTCGCTCAGGGCAAGCCCAAGGCCG 66979 ||| || |||| || ||| || ||||||| | | |||||| || | || |||| Sbjct 25177 GGGTGCATGGTACAGCTACAATGGCGACAAGA---TTGGTCAGGGTAAATCGAATGCCG 25122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243888267389589