Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq1 246 3e-60 >seq1 Length=970878 Score = 246 bits (272), Expect = 3e-60 Identities = 283/378 (75%), Gaps = 2/378 (1%) Strand=Plus/Plus Query 121985 GATGTCGTCAAAGACGATCGACGGGTCTGCCAGGATGTTGCGGATGATGTGGGTGTACGA 122044 ||| |||||||| || | || ||| || | ||||| ||||||||||||||||| || Sbjct 156511 GATATCGTCAAAAACTACCGCCGGATCGTTAACAATGTTACGGATGATGTGGGTGTAAGA 156570 Query 122045 ACGAGAGTGAATAGTCTCACTGAACGCCCAAGTCTCCACCCAAGTTTCCAGGGT-GGTGT 122103 ||| |||||||| ||||| ||||||||| || || | ||| |||||||| || | Sbjct 156571 ACGGGAGTGAATCGTCTCTGAGAACGCCCAGGTTTCAATCCAGGTTTCCAGTTCAGGAAT 156630 Query 122104 CGGATACGATCGGCAGAAGAACTGCGTTCGGGCCACGGCCCTGTACAGAGTCCAGAAGGA 122163 || | | | |||||| || | ||||||||| |||||||| | || ||||| || Sbjct 156631 CG-AGATCAGCGGCAGCAGCGCGACGTTCGGGCTGCGGCCCTGAATCGAATCCAGCAGCG 156689 Query 122164 TCTGATACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGAAGATTCATGTAGT 122223 |||||||||||||||||||||| ||||| || || || |||||||| || | ||| | Sbjct 156690 TCTGATACTTCAGGTTGCTGATAAAGATATGTTTTTCATGATCCGGCAGCGCCTGGTAAT 156749 Query 122224 CAATTCGGTCACGGGTCACGTTCACCTCTTCCGGACGCCAGAAGAATGCCAGTTGCTTTT 122283 | || || || || | |||| ||||||||||||||||||||||| | || ||||||| Sbjct 156750 CGATGCGATCGCGTGAAACGTCGACCTCTTCCGGACGCCAGAAGAAGGAGAGCTGCTTTT 156809 Query 122284 CGATCAGCTTTTCGAACTTAGCGTGTTTTTGCTGGTCATAACGAGAAACGTTCGGCGTCT 122343 ||||||||||||| || | | | |||||||||||| | || | ||||| | || Sbjct 156810 CGATCAGCTTTTCAAAGATGTCATATTTTTGCTGGTCGAAGCGCGCCACGTTTACGGACT 156869 Query 122344 CACCGAGGAACATCGGCT 122361 ||||| |||||||||| Sbjct 156870 GACCGAAAAACATCGGCT 156887 Score = 150 bits (166), Expect = 2e-31 Identities = 1148/1815 (63%), Gaps = 92/1815 (5%) Strand=Plus/Plus Query 122849 CGAGGCGGCTCGAACCCGTTCGTTGAGTTGGTGATCTGACTTGACGTCTCGCACGGCATC 122908 || || ||||| | ||||| || | |||| |||||| || || || |||||||| Sbjct 157376 CGCGGAGGCTCAATACCGTTGGTGGCATTGGAGATCTGCGACGAGGTTTCAGACGGCATC 157435 Query 122909 ATGGTTGACAGCGTAGAGTTACGCAGGCCATGGATAGCGATTTGAGAGCGAAGCCATTCC 122968 | | ||||| || ||||| |||||||| || | || | || || | |||| Sbjct 157436 AGCGCAGACAGGGTCGAGTTGCGCAGGCCGTGCGTTTTAATCTCTTCACGCAGGCTTTCC 157495 Query 122969 CAATCCATCTTCAGTTCAGCGGTGTGGAGATTATCCACTTCCTTTTTGTAACGGTCAATA 123028 || || | | ||| || || || |||| || || ||||| ||| ||| Sbjct 157496 CAGTCGAGATGCAGCGGTTCGTTGCTGATCGCGTCCAGATCTTTCTTGTAGGTGTCGATA 157555 Query 123029 GGCAGAATGCCTTGGGAGTATGAGGTTTGGTCATACAGCTTACACTTCCCAAGTTCCTTC 123088 ||||||||||| || | || | ||||| | || | || || | || ||| Sbjct 157556 GGCAGAATGCCCTGCGCATAGGTGGTTTCATTGAACCACGGGCAGGCACCTTGCTCTTTC 157615 Query 123089 GCCAGATCCATCGACGCTTCCAGCAGGTAGAACTGGAATGCTTCTG----CCAGTTCGTG 123144 ||||| || | || |||| ||||||||| |||| | ||||| | || ||| Sbjct 157616 GCCAGCTCATTTGAGGCTTTCAGCAGGTAATACTGAATCGCTTCAAAGGTCTTGTGCGTC 157675 Query 123145 AACCGCATT--CGCAGCACGAGGATCACTGTACTTCAGTCCACGCTTCGCCAAGTAATAC 123202 | | |||| ||| || ||| ||| || ||| ||||||||| || || Sbjct 157676 AGGC-CATTGGCGCTGCCATCGGA-----GTAGCGCACACCATGCTTCGCCAGATAGTAG 157729 Query 123203 GCCAGGTTGGTCCAGCCAATACCCAGCGTTCGACGATCCTTAGT-CTTCTCTG--CCGCC 123259 || |||| | ||| |||||||| || |||||| || | | | | ||| | ||| Sbjct 157730 GCGTAGTTGATGACGCCGATACCCAGAGTACGACGACCCATCGCGCCACGCTGGGCAGCC 157789 Query 123260 AGTACCGGGTAGTTCTGGTAGTCCAACAGACGGTCAAGTGAGCGCAC--CAAGGTGCGTA 123317 | | |||||||| ||| ||||| | ||| ||||| | || || | ||| ||| Sbjct 157790 GGGATCGGGTAGTCCTGATAGTCGAGCAGCGCATCAAGCGCACGTACGGCCAGG---GTA 157846 Query 123318 CCGGGC-CACGGAGGTCTTCCAGACTCTCTACCTTGCCGAGGTTGATTGCAGACAGCGTA 123376 | || | || || || || || || | ||||||||||| ||||| |||||| Sbjct 157847 GCCAGCTCTTCCAGATCGTCGAGGCTTTCGATGGCGCCGAGGTTGAACGCAGAGAGCGTA 157906 Query 123377 CAAAGTGCAATCTCGCCATCGTCCTCAGGATTTTTGAGGTCATTGATCGCGTGAGTAGGC 123436 || || |||||||| || | || || || | || | | || | || ||| Sbjct 157907 CACAGGGCAATCTCACCGTTTTCGTCG------TTAACATCTTCCAGCGGTTTCGTCGGC 157960 Query 123437 AGGGCAATCTCCATGCACAGGTTGGACTGTTTCACCGGGGCCAGTTCT-GGATTGAACGG 123495 ||||| || |||| ||| ||||| ||||| ||||| || | | || || | ||||| Sbjct 157961 AGGGCGATTTCCAGGCAGAGGTTAGACTGGCGAACCGGCGCAA-TGCTCGGGTCAAACGG 158019 Query 123496 GCTGTTGGTGTTGCAGTGGTCAACGTGCTGAATGTAGATGCGTCCTGTCTGACTGCGCTC 123555 ||||| |||||||||||| || |||| |||||||||||| || || || ||| || Sbjct 158020 GCTGTGGGTGTTGCAGTGATCGACGTTCTGAATGTAGATACGGCCGGTAGAGGCGCGTTC 158079 Query 123556 CTGCATAGCCACGGAGAAGGCTTCTGCTGCGGAGATGCTTTTCTTAGCCACTTC-CGGAT 123614 |||||| || |||||| || | || | | | ||| || | | | ||| Sbjct 158080 CTGCATCATCAGTGAGAAGAGATCGACCGCTTTAACACGCTGCTT-GCGGATGCTCTGAT 158138 Query 123615 CGGCTTCCAACTTCTCGTACA-ACTCT-TCAAATTTCTTCTGGTCGGAGAAGAAATACTC 123672 | || | | | | ||| | | | ||||| | | ||| | || |||||| || Sbjct 158139 C--CTGCTCATATTTGGTATAGAGGCGCTCAAACTCATCCTGATTGGCGAAGAATGCGTC 158196 Query 123673 GTACAGCTTGCCACCTGCAACGTT---CGGGTGGAACAGAGTGATAT-TTCGCCCATGTT 123728 ||||| |||| ||| ||| |||| |||||| ||||||| |||||| | Sbjct 158197 ATACAG---GCCAG--GCA-CGTCAGACGGGCTGAACAGGGTGATATCTTCGCCTTTCA- 158249 Query 123729 GCAGACGTGCATACAGCATTTTGTTGATTTGCAGGCCGTAGTCAACGTGACGAGCACGGG 123788 |||| || ||||| || ||||||| || | || ||||| | |||||| | ||| Sbjct 158250 GCAGGCGCTGATACATCAGCTTGTTGAGCTGTACACCATAGTCCATGTGACGCACGCGGT 158309 Query 123789 TGCTCTCTGTGCCACGGTTGTTCTTCATCACGATCAGGTTTTCGAAATCCCAGTGCCACA 123848 ||| || |||||||||||||||| ||| | |||| |||||| ||| ||||||| Sbjct 158310 TGCCTTCAACACCACGGTTGTTCTTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACA 158369 Query 123849 TAGGGTAGAAGTAAGTTGC--CGAAGCCTTACGTACACCACCCTGAGA-----TGTCCAC 123901 | |||||||| || || || ||| ||| || || |||||||| | ||| Sbjct 158370 TCGGGTAGAACAGCGTGGCTGCGCCGCC--ACGAACGCCGCCCTGAGAACAGGACTTCAC 158427 Query 123902 C-----CCAGACCTTCTTGGTAAGAACGGACGATCGGCACAGTTCCTGCGTGTTTCACCT 123956 | | || | |||| ||||||| ||| |||| || | || | | | Sbjct 158428 CGCGGTCTGGAAATGCTTG--TAGAACGG--GAT----ACAG--CCGGTATGGAACGCTT 158477 Query 123957 CTCCGCCACGGATTGGTGCGTCCTGACCACGAATCATGCCAAAGTTAAGGCCGATCCCTG 124016 | ||||| || || || | || | |||| || || ||| | ||||| || | Sbjct 158478 CACCGCCGCGAATCGGGCTGCCCAGCGCACGGATACGACCGGCGTTGATACCGATGCCGG 158537 Query 124017 CTCGCTGGGCAGCGTATTT-AC-CTTGCGCCGTCAGT-GCGTTGAAGATCTGGTCGATAT 124073 | ||||| | | ||||| || |||||| | || ||||| ||| ||| | Sbjct 158538 CACGCTGAGAGACATATTTCACAATTGCGCTGGAGGTGGCGTT---GATGGAGTCCAGGC 158594 Query 124074 CATCGCCGGACTCGATCAATACGCAAGAACTGAACTGTCGTGTCGGAGTACGAACACCCG 124133 |||||| ||||||||| || || || |||||||| ||||| || || || || || | Sbjct 158595 TGTCGCCGCACTCGATCAGCACACAGGAGCTGAACTGACGTGTTGGGGTGCGTACGCCAG 158654 Query 124134 CCATGATCGGTGTCGGCAGAGACACCTTCATCAGGGACACGTTCTCGTACAGATCAAC-- 124191 |||||| || |||||||| || | || | | | | | || | | || | ||| Sbjct 158655 ACATGATTGGCGTCGGCAGGGAGATTTTAAAC---GTCGAGATCGCAT-CATAGAAACGC 158710 Query 124192 --GATACGCTCCAGACGAGTG--GCCTTGTCCTCCTTGGACAGAAGGCCCATTGCAATCA 124247 ||| |||| ||| ||| || | || ||| | |||| || | || Sbjct 158711 TTGATGTAATCCATACGCGTGTCGCGCGGGTAGCC--GGAGAAGAGGCAGGCGGCGACCA 158768 Query 124248 GCAT-CAGCGCCATCTGTGGAGATTCGTAAATCTCGCCAGAGACACGGTTCTTGACCAGA 124306 | || || | | ||| | |||||| || || || || || ||||||| |||||| Sbjct 158769 GAATGTAGAG-GAACTGCGCGCTTTCGTAGATTTCACCCGAAACGCGGTTCTGCACCAGA 158827 Query 124307 TACTTGTCTTCGTACTGACGCATCGCTGCATAAGTGTAGTCGAAGTCACGATCGTGTACG 124366 || ||| |||| ||| || || ||||| | | ||| | |||||| ||| || Sbjct 158828 TATTTGCCTTCCAGCTGCTTCACAGCGGCATAGGAGAAGTTCATGTCACGCCAGTGGTCG 158887 Query 124367 ATCTTGCCGTCGAGGAAGTCGATTTCGTCACGGCTGTAGTCTTCCAGCAGGTGACGGTCA 124426 | |||| | | | || || ||||||| ||||||||||||||||| ||| Sbjct 158888 AGGAACTCGTCCATCTGCGCAAACTCTTCCTGGCTGTAATCTTCCAGCAGGTGACGATCA 158947 Query 124427 TACTT-CCCATTCCCAACATTCAGATAAATCTGCTCGAACAGGCTGAATGGCTTGAAGTC 124485 || || ||||| | | || || | | ||| || | || | |||| || | Sbjct 158948 TATTTGCCCATGTCGACCA-TCTTAACGACCTGGTCATAGAGCTTTGGCGGCTCAAACTG 159006 Query 124486 ACCATACGCCTCTTTTCGGATCTTGAACAGCAGCAGTCGTGCAGCGGCATACTGATAATC 124545 ||||||||| | ||| || | | ||| | | ||| || ||||| |||||||| || Sbjct 159007 ACCATACGCTTTTTTGCGCAGGTGGAAGATCGCCAGGCGGGCAGCCAGGTACTGATAGTC 159066 Query 124546 CGGGTTCTGTACACTGATCAGGTCTGAAGCGGCTTTGATCAGGGTGTCATGAATTGCCCG 124605 ||| | ||| ||||||| ||||| ||||| | ||| |||||||| | Sbjct 159067 AGGGGCATCGCGGGAGATGAGGTCTGCTGCGGCCTTGATGATGGTCTCATGAATGTCAGA 159126 Query 124606 GGTTGTTACGCCATC 124620 |||| | | |||||| Sbjct 159127 GGTTCTGATGCCATC 159141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485990106032160