Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_023734.1 Length=35725 Score E Sequences producing significant alignments: (Bits) Value seq174 109 1e-19 >seq174 Length=42168 Score = 109 bits (120), Expect = 1e-19 Identities = 190/274 (69%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 15852 GTTAATATTAACTCTCCTGGTGGTGATGTATTCGAAGGTTTGGCAATCTACAACATGCTG 15911 ||| |||| ||||| ||||| || ||| | || || || | || ||||||||| | || Sbjct 18817 GTTTATATCAACTCCCCTGGCGGCGATATGTTTGAGGGAGTTGCGATCTACAACCTTCTT 18758 Query 15912 CGCGAATATTCTGGCCATGTGACGGTCAGAGTGCTTGGTATGGCTGCGAGCGCCGCATCA 15971 || || || ||| | |||||||| | | | || || ||||||| || || ||| Sbjct 18757 CGTGAGTACAGCGGCAAGGTGACGGTAAAAATTCTCGGCCTGGCTGCTTCTGCGGCGTCA 18698 Query 15972 TTTATTGCGATGGCTGCTGATGAAGTGAAGATTGCGCGCGCAGGCTTCTTTATGATTCAC 16031 | ||||||||||| | ||||||| | |||| | ||| | | |||| | ||||||||| Sbjct 18697 GTAATTGCGATGGCCGGTGATGAAATTCAGATCGGGCGTGGTGCCTTCCTGATGATTCAC 18638 Query 16032 AATGCTTGGACCGGCGTTGGCGGTAACCGTAATGATATGCGTGAAGTGGCTGACT-TCTT 16090 || || |||| | | | |||||| | || ||| | || ||| ||||||| |||| Sbjct 18637 AACGCCTGGATCATGGCCGCAGGTAACAGGAACGATTTCCGCGAATACGCTGACTATCTT 18578 Query 16091 GGAGCAAATCGATGCAACCATCGCTGATATCTAC 16124 |||| | || | | || || ||||||||| Sbjct 18577 -GAGCCTTTTGACAGAGCAATGGCAGATATCTAC 18545 Score = 95.1 bits (104), Expect = 3e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 17604 TTTGACCGTGAAGATGCCAACGTCGTCGTTTCTACTGAGAACGCCGACGATTTTGAGAAA 17663 ||||| || || ||||||||||| || | || | || |||||||| || |||||||| Sbjct 17140 TTTGATCGCGAGGATGCCAACGTAGTTATCTCAAGCGAAAACGCCGATGACTTTGAGAAG 17081 Query 17664 AACATGGTATCAATCCGTGCTGAAGAGCGCTTGGCACTGGCTGTCTATCGTCCGCAGGCA 17723 |||||| | |||||||| |||||| ||| | || || || |||||||||||| | || Sbjct 17080 AACATGATCTCAATCCGCTGTGAAGAACGCGTTGCGCTTGCGGTCTATCGTCCGGAAGCG 17021 Query 17724 TTTGT 17728 || || Sbjct 17020 TTCGT 17016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114189762960886