Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_023856.1 Length=152460 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 >seq1 Length=970878 Score = 118 bits (130), Expect = 1e-21 Identities = 272/406 (67%), Gaps = 8/406 (2%) Strand=Plus/Minus Query 31479 CTTCCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTT 31538 || || || || |||||||| ||||| || |||||||| || || ||||| || ||||| Sbjct 158673 CTGCCGACGCCAATCATGTCTGGCGTACGCACCCCAACACGTCAGTTCAGCTCCTGTGTG 158614 Query 31539 CTTATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGAT 31598 || ||| | ||| |||| ||||||| ||||| || || ||| ||||| | Sbjct 158613 CTGATCGAGTGCGGCGACAGCCTGGACTCCATCAACGCCACCTCCAGCGCAATTGTGAAA 158554 Query 31599 TATGTATCCAAACGCGCTGGGATCGGATTTGATGTTGGAGCAATTCGTGGCATCGGTAGC 31658 ||||| || | || || || ||||| | | | || || |||| | || ||| Sbjct 158553 TATGTCTCTCAGCGTGCCGGCATCGGTATCAACGCCGGTCGTATCCGTGCGCTGGGCAGC 158494 Query 31659 CCTATCCGAAAAGGTGAAATGGTGCACACAGGCCTGGTTCCTTTCATAAAATATCT---G 31715 || || || |||||| | | || || ||| | || ||| || || | | Sbjct 158493 CCGATTCGCGGCGGTGAAGCGTTCCATACCGGCTGTATCCCGTTCTACAAGCATTTCCAG 158434 Query 31716 ACTGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGCAACT-TGCTA 31774 || | || | ||||| || ||||| ||||| |||||||||| |||| || || | Sbjct 158433 ACCGCGG---TGAAGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGCCACGCTGTTC 158377 Query 31775 TATCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTCT 31834 || ||| || |||||| || | || | |||| |||||||||||||||||| | Sbjct 158376 TA-CCCGATGTGGCATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGTGT 158318 Query 31835 TGAAGAGAACCGTGAACGCCGTATCGACTATGGTATTCAGATCAAC 31880 ||||| ||||| | || | || ||||||||| | ||| ||||| Sbjct 158317 TGAAGGCAACCGCGTGCGTCACATGGACTATGGTGTACAGCTCAAC 158272 Score = 82.4 bits (90), Expect = 7e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 96737 AATTTGGCGACGATGGCAGGACTTGAACCTGCGACATACGATTTAACAGACCGCCGTTCT 96796 |||||||| | || | ||||| ||||| | |||||||| ||||||| |||||||||| Sbjct 378711 AATTTGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCT 378770 Query 96797 ACCGACTGAACTACA 96811 ||||||||||||||| Sbjct 378771 ACCGACTGAACTACA 378785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487705169480800