Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_024121.1 Length=167266 Score E Sequences producing significant alignments: (Bits) Value seq1 178 1e-39 >seq1 Length=970878 Score = 178 bits (196), Expect = 1e-39 Identities = 288/412 (70%), Gaps = 2/412 (0%) Strand=Plus/Plus Query 139708 ACATCAGATCGTTGATTTGCACACCGTAATCCAAGTGACGAATGCGGTTCTCTTCAACGC 139767 ||||||| | ||||| || ||||| || |||| |||||| | |||||| ||||||| | Sbjct 158262 ACATCAGCTTGTTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACAC 158321 Query 139768 CTTTGTTGTTTTTCAGAACAAGCAAGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACA 139827 | |||||| ||||| || |||| | |||| | ||||| ||||| || || ||| ||| Sbjct 158322 CACGGTTGTTCTTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACA 158381 Query 139828 ACGTCGCTGCACCACCACGAACACCACCTTGAGAACAGGATTTAACCGCAGTCTGGAAGT 139887 ||| ||||| || |||||||| || || ||||||||||| || ||||| |||||||| | Sbjct 158382 GCGTGGCTGCGCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAAT 158441 Query 139888 GTTTCCAGAAAGGAATTACGCCAGTGTGTTTGACTTCACCGAAACCAATTTTTGAGCCTT 139947 | || |||| || || ||| || || |||||||| | ||| ||| Sbjct 158442 GCTTGTAGAACGGGATACAGCCGGTATGGAACGCTTCACCGCCGCGAATCGGGCTGCCCA 158501 Query 139948 CAGCTCGGATTCGACCTGCGTTGATGCCGATTCCAGCTCGTTTAGAAATGTACTTGACAA 140007 || ||||| ||||| |||||||| ||||| || || || | ||| | || || |||| Sbjct 158502 GCGCACGGATACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTTCACAA 158561 Query 140008 TCGATGCT-GCTGAGTCGTTGATACTGTTAAGCGAATCATCAGACTCGATAACAACACAC 140066 | | ||| | | | ||||||| || || || | ||||||| | ||||| Sbjct 158562 TTG-CGCTGGAGGTGGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGCACACAG 158620 Query 140067 GAACTGAATTGACGAATCGGTGTACGGGCTCCTGCCATAATAGGAGTTGGCA 140118 || ||||| ||||| | || || || | || | ||| || || || |||| Sbjct 158621 GAGCTGAACTGACGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCA 158672 Score = 136 bits (150), Expect = 4e-27 Identities = 225/322 (70%), Gaps = 12/322 (4%) Strand=Plus/Plus Query 138053 AACGTTGCGCATGATGTGGGTGTAAGAACGAGAGTGAATGGTCTCAGAGAATGTCCAAGT 138112 || ||| || |||||||||||||||||||| |||||||| ||||| ||||| | ||| || Sbjct 156544 AATGTTACGGATGATGTGGGTGTAAGAACGGGAGTGAATCGTCTCTGAGAACGCCCAGGT 156603 Query 138113 CTGAATCCATGTTTCAAGTCCAACATCAGAACAGATATCAGCG-----AATGCGATAGCA 138167 | |||||| ||||| ||| || ||| || ||||||| | |||| | Sbjct 156604 TTCAATCCAGGTTTCCAGTTCA-----GGAATCGAGATCAGCGGCAGCAGCGCGA-CGTT 156657 Query 138168 GGTGCT-CGTCCTTGAACTGAATCAAGGAGTGTTTGATATTTCAAGTTGTTGGTGAAAAT 138226 | ||| || || |||| ||||| || || || ||||| |||| |||| || | || || Sbjct 156658 CGGGCTGCGGCCCTGAATCGAATCCAGCAGCGTCTGATACTTCAGGTTGCTGATAAAGAT 156717 Query 138227 GCCTTGATCGTTTTCAGACATTTTCTGGAATTGAACACGATCTTTGGATACGTCTACTTC 138286 || || | || | || |||| | | | ||||| || ||||| || || Sbjct 156718 ATGTTTTTCATGATCCGGCAGCGCCTGGTAATCGATGCGATCGCGTGAAACGTCGACCTC 156777 Query 138287 TTCTGGACGCCAAAAGAAGGAGAGTTGCTTTTCAGTCAACTTTTCAAATTTTTCGTGTTT 138346 ||| |||||||| ||||||||||| |||||||| ||| ||||||||| | || | ||| Sbjct 156778 TTCCGGACGCCAGAAGAAGGAGAGCTGCTTTTCGATCAGCTTTTCAAAGATGTCATATTT 156837 Query 138347 TGGATCATCGTATCGAGCTACG 138368 | | | ||| | || || ||| Sbjct 156838 TTGCTGGTCGAAGCGCGCCACG 156859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535080597504240