Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_024124.2 Length=169148 Score E Sequences producing significant alignments: (Bits) Value seq13 187 3e-42 seq2 123 3e-23 seq1 84.2 2e-11 >seq13 Length=199142 Score = 187 bits (206), Expect = 3e-42 Identities = 147/176 (84%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 108422 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 108481 ||||| || || |||||||| ||||||||||| || ||||| ||||||||||||||||| Sbjct 145503 GGTGGACAGCATCTGAACGTCAACGTTCTGCGCCGCGAAACGCTGGAAGATGCAGTTAAA 145444 Query 108482 CATCCGGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 108541 ||||| ||||| ||||| |||||||| ||||| || || || ||||| || || |||||| Sbjct 145443 CATCCTGAAAACTATCCGCAGCTGACTATCCGCGTTTCAGGCTATGCCGTGCGTTTTAAC 145384 Query 108542 TCTCTGACTCCAGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAGAGTCT 108597 || || || || || |||||||||||||| || | |||||||||||||| ||||| Sbjct 145383 TCACTCACGCCTGAGCAGCAGCGCGACGTGATTACCCGTACCTTTACTGAAAGTCT 145328 >seq2 Length=722220 Score = 123 bits (136), Expect = 3e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 108422 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 108481 || ||||| ||||| |||||||||||| || ||||||| ||| ||||| | | Sbjct 515225 GGCGGTCAGCACCTCAACGTTAACGTTATGAACCGTGAAATGCTGCTGGATGCGATGGAA 515166 Query 108482 CATCCGGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 108541 ||||| || |||||||| || |||||||| || || |||||||| || || ||||||||| Sbjct 515165 CATCCAGAGAAATATCCGCAACTGACCATTCGCGTTTCCGGTTACGCTGTGCGCTTTAAC 515106 Query 108542 TCTCTGACTCCAGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAG 108592 || |||||| ||| ||||||| || || || | || ||||| ||| || Sbjct 515105 TCACTGACTAAAGAGCAGCAGCAGGATGTGATTACCCGAACCTTCACTAAG 515055 >seq1 Length=970878 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 27440 GGTGAAG--TTCGACATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAA 27497 ||||||| ||| ||||| || ||| || |||| || |||||||| || || || | Sbjct 158481 GGTGAAGCGTTC--CATACCGGCTGTATCCCGTTCTACAAGCATTTCCAGACCGCGGTGA 158424 Query 27498 AATCTTGTTCTCAAGGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGC 27557 | || |||||||| || || ||||||| || || || || || || |||||||||| Sbjct 158423 AGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGCCACGCTGTTCTACCCGATGTGGC 158364 Query 27558 ACTTAGAAGTAGAGAACCTATTAGTTCTGAAAAATAATAAAGGTGTGGATGAAAACCGTA 27617 | | ||| | || | ||| | || ||||| || || ||||| || | ||||| Sbjct 158363 ATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGTGTTGAAGGCAACCGCG 158304 Query 27618 TTCGACATATGGACTACGG 27636 | || || |||||||| || Sbjct 158303 TGCGTCACATGGACTATGG 158285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541102518045920