Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_024125.2 Length=168470 Score E Sequences producing significant alignments: (Bits) Value seq13 192 6e-44 seq2 127 2e-24 seq1 125 8e-24 >seq13 Length=199142 Score = 192 bits (212), Expect = 6e-44 Identities = 150/179 (84%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 62918 ACTCTCGGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAA 62977 ||| || ||||||||||| | || |||||||||||||| || || || || |||||||| Sbjct 145330 ACTTTCAGTAAAGGTACGGGTAATCACGTCGCGCTGCTGCTCAGGCGTGAGTGAGTTAAA 145389 Query 62978 GCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAAC 63037 || || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||| Sbjct 145390 ACGCACGGCATAGCCTGAAACGCGGATAGTCAGCTGCGGATAGTTTTCAGGATGTTTAAC 145449 Query 63038 TGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAA 63096 |||||||||||| ||||| || ||||||||||| |||||||| || || |||||||||| Sbjct 145450 TGCATCTTCCAGCGTTTCGCGGCGCAGAACGTTGACGTTCAGATGCTGTCCACCTTCAA 145508 >seq2 Length=722220 Score = 127 bits (140), Expect = 2e-24 Identities = 132/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 62925 GTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 62984 || ||||| || | || || || ||||||| || |||||| ||||||||||| || Sbjct 515059 GTGAAGGTTCGGGTAATCACATCCTGCTGCTGCTCTTTAGTCAGTGAGTTAAAGCGCACA 515118 Query 62985 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 63044 || |||||||| || || |||||||| ||||||||||| || ||||| | | ||||| Sbjct 515119 GCGTAACCGGAAACGCGAATGGTCAGTTGCGGATATTTCTCTGGATGTTCCATCGCATCC 515178 Query 63045 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 63097 ||| ||||||| || |||||||||||| ||||| ||||| ||||| || Sbjct 515179 AGCAGCATTTCACGGTTCATAACGTTAACGTTGAGGTGCTGACCGCCTTCGAT 515231 >seq1 Length=970878 Score = 125 bits (138), Expect = 8e-24 Identities = 270/401 (67%), Gaps = 2/401 (0%) Strand=Plus/Plus Query 140762 TTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTT 140821 || || || |||||||| ||||| ||||| | |||||| |||| || || ||| || Sbjct 158273 TTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACCACGGTTGTTC 158332 Query 140822 TTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATA-AGCAGTAGCAGC 140880 |||| || || || |||| | ||||| |||||| || || || | ||| || || || Sbjct 158333 TTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAGC-GTGGCTGC 158391 Query 140881 GCCGCCACGAATTCCACCCTGTGAACATGATTTAACAGCAGTCTGAAAATGTTTCCAAAA 140940 ||||||||||| || ||||| ||||| || || || || ||||| ||||| || | || Sbjct 158392 GCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAATGCTTGTAGAA 158451 Query 140941 AGGAATAACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTCAGCACGAAT 141000 || ||| || |||||| ||||||| || |||| || ||||| || Sbjct 158452 CGGGATACAGCCGGTATGGAACGCTTCACCGCCGCGAATCGGGCTGCCCAGCGCACGGAT 158511 Query 141001 CATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCGGA 141060 ||| |||| ||||| || || || || | ||||| ||||| ||||||| ||| Sbjct 158512 ACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTTCACAATTGCGCTGGA 158571 Query 141061 AGCCTTATTGATAGACTTCAATGAATCTCCTGCCTCAATAACAACACATGAACTAAACTG 141120 | ||||| || | || || || ||| || | ||||| || || ||||| Sbjct 158572 GGTGGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGCACACAGGAGCTGAACTG 158631 Query 141121 TCGAGTCGGAGTACGGCAACCAGCCATAATAGGAGTTGGCA 141161 || || || || || |||| ||| || || || |||| Sbjct 158632 ACGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCA 158672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538933090773200