Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_024216.1 Length=160541 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 2e-13 >seq2 Length=722220 Score = 91.5 bits (100), Expect = 2e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 32941 ACGGAGGGTTGGCAGAGTGGATTATTGCAGCGGTCTTGAAAACCGCCGAGGGTAAAACCT 33000 |||||||| |||| ||| || ||| ||||||||||||||||||||||| || ||| | | Sbjct 589115 ACGGAGGGGTGGCCGAGCGGCTTAAGGCAGCGGTCTTGAAAACCGCCGATGGGAAACCAT 589174 Query 33001 CCGTGAGTTCAAATCTCACACCCTCCTCCA 33030 ||| |||||| |||||| | ||||| ||| Sbjct 589175 CCGAGAGTTCGAATCTCTCCTCCTCCGCCA 589204 Score = 89.7 bits (98), Expect = 5e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 32942 CGGAGGGTTGGCAGAGTGGATTATTGCAGCGGTCTTGAAAACCGCCGAGGGTAAAACCTC 33001 ||||||| |||| ||| || ||| ||||||||||||||||||||||| || ||| | || Sbjct 588961 CGGAGGGGTGGCCGAGCGGCTTAAGGCAGCGGTCTTGAAAACCGCCGATGGGAAACCATC 589020 Query 33002 CGTGAGTTCAAATCTCACACCCTCCTCCA 33030 || |||||| |||||| | ||||| ||| Sbjct 589021 CGAGAGTTCGAATCTCTCCTCCTCCGCCA 589049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513562310765240