Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq3 150 5e-32 >seq3 Length=630259 Score = 150 bits (166), Expect = 5e-32 Identities = 211/296 (71%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253 ||||| || | || || ||||| ||||| | | || | || ||||| ||||| || Sbjct 50810 ATGGCCAGTCGTGGCGTTAACAAAGTGATTCTTGTCGGGAATCTGGGTCAGGATCCGGAA 50869 Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313 || || ||| | |||| || ||||| || || ||||| || | || ||||| || Sbjct 50870 GTACGTTATATGCCAAATGGTGGCGCTGTTGCCAACATTACGCTGGCTACGTCGGAAAGC 50929 Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTG 38373 ||||| || ||||| ||||| | ||||||| || ||||||||||| || || Sbjct 50930 TGGCGCGACAAGCAGACCGGTGAAAACAAAGAGATCACTGAGTGGCACCGTGTGGTGCTG 50989 Query 38374 TTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATT 38433 ||||| || ||||||||||| || || |||||||| ||||||||| || || ||||| Sbjct 50990 TTTGGCAAACTGGCTGAAGTCGCGGGTGAATACCTGAAAAAAGGATCGCAGGTCTATATC 51049 Query 38434 GAAGGCCAGCTTGAAACTAAGAAGTGGCGGGATCAAAGCGGTCAGGACCGATACAC 38489 ||||||||||| || || |||| |||||| | || ||||| || ||||| Sbjct 51050 GAAGGCCAGCTGCGCACCCGTAAATGGCAGGATCAGGGTGGCCAGGAGCGTTACAC 51105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132889148584318