Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq1 228 9e-55 seq3 174 2e-38 seq13 165 9e-36 >seq1 Length=970878 Score = 228 bits (252), Expect = 9e-55 Identities = 1051/1639 (64%), Gaps = 85/1639 (5%) Strand=Plus/Minus Query 41180 CCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGCGTAGTG 41239 || ||||| || ||| |||| || || || || || |||||||| | || || || Sbjct 158670 CCGACGCCAATCATGTCTGGCGTACGCACCCCAACACGTCAGTTCAGCTCCTGTGTGCTG 158611 Query 41240 ATTGAATCAGGTGATTCCCTGGGTTCTCTGAATGCTGTAACCTCT---GCGATCGTGAAG 41296 || || | || || ||||| || | || || ||||| || || ||||| Sbjct 158610 ATCGAGTGCGGCGACAGCCTGGACTCCATCAACGCC---ACCTCCAGCGCAATTGTGAAA 158554 Query 41297 TATATTTCACAACGTGCTGGTATCGGTGTTAATGCTGGACACATTCGCGCAATGGGTTCT 41356 ||| | || || ||||| || |||||| | || || || | || || || |||| Sbjct 158553 TATGTCTCTCAGCGTGCCGGCATCGGTATCAACGCCGGTCGTATCCGTGCGCTGGGCAGC 158494 Query 41357 AAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAACATATTCAG 41416 || || || |||||||| | ||||| ||| |||||||||| || ||| | ||| Sbjct 158493 CCGATTCGCGGCGGTGAAGCGTTCCATACCGGCTGTATCCCGTTCTACAAGCATTTCCAG 158434 Query 41417 ACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTGTATTAT 41476 || ||||| || |||||||| || || ||||||||||| || || || ||| ||| || Sbjct 158433 ACCGCGGTGAAGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGCCACGCTGTTCTAC 158374 Query 41477 CCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTTGAG 41536 ||||| |||||| ||||| | |||| ||||||||| ||||| |||||| |||||||| Sbjct 158373 CCGATGTGGCATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGTGTTGAA 158314 Query 41537 AATAACCGCATTCGTCACCTGGATTATGGCGTTCAGCTTAACGATTTGATGTATAAGCGT 41596 |||||| | |||||| |||| ||||| || ||||| ||| | |||||||| |||| Sbjct 158313 GGCAACCGCGTGCGTCACATGGACTATGGTGTACAGCTCAACAAGCTGATGTATCAGCGC 158254 Query 41597 TTAATCAATAACGATTACATCACACTGTTCAGCC---CTGACGTTGCAAATGATCGCCTG 41653 | | || ||| | ||||| |||||||||| |||||| ||| | ||||| Sbjct 158253 CTGCTGAAAGGCGAAGATATCACCCTGTTCAGCCCGTCTGACG-TGC-----CTGGCCTG 158200 Query 41654 TATGATGCTTTCTATCAAGCTGATCAGACTGAGTTCGAAGAACTCTATACCAGTTTGGAA 41713 ||||| || |||| || || ||||| |||||| || |||||||||| | || Sbjct 158199 TATGACGCATTCT-TC--GCCAATCAGGATGAGTTTGAGCGCCTCTATACCAAATATGAG 158143 Query 41714 AAAGACCCAACGGTACGCAAGAAACGCATTAAAGCAGCAGACTTATTCCAGTTGCTTGTT 41773 | || | | | |||||| | || ||||||| | || | ||| || | | Sbjct 158142 CAGGATCAGAGCATCCGCAAGCAGCGTGTTAAAGCGGTCGATCTCTTCTCACTGATGATG 158083 Query 41774 CAGGAACGCGCACAGACCGGACGCAAATATATTTTCAACAGTC-ATCACGTCAACCAGCA 41832 ||||||||||| ||||| || | || ||| ||| ||| ||||| |||| || Sbjct 158082 CAGGAACGCGCCTCTACCGGCCGTATCTACATTCAGAAC-GTCGATCACTGCAACACCCA 158024 Query 41833 -GGGCAGTTTCTCC--------GTTCCTGTTCGTATGTCGAACCTTTGCTGTGAAATTGC 41883 | | |||| || | || ||||| ||| ||||| ||| ||||| || Sbjct 158023 CAGCCCGTTTGACCCGAGCATTGCGCCGGTTCGCCAGTCTAACCTCTGCCTGGAAATCGC 157964 Query 41884 GATCCCAACGTCACCTCTGGATGATG---ACGACAAGTTAGCAGGTGAAATCGGACTGTG 41940 | || ||| ||| ||||| |||| ||||| | | ||||| || | ||||| Sbjct 157963 CCTGCCGACGAAACCGCTGGAAGATGTTAACGACGA---AAACGGTGAGATTGCCCTGTG 157907 Query 41941 TACGCTTATGGCTATCGTTCTCGATAACGCTGATGTAAG------CGAATTCCCAGCCCT 41994 |||||| || || |||| ||| | ||| ||| | || || Sbjct 157906 TACGCTCTCTGCGTTCAACCTCG---GCGCCATCGAAAGCCTCGACGATCTGGAAGAGCT 157850 Query 41995 ---TACACGTATTGCAGTACGCGCACTGGATAACCTGTTGGATTACCAGAACTACCCTGT 42051 ||| | | || ||||| || || ||| ||| | || || ||| ||||||| | Sbjct 157849 GGCTACCC---TGGCCGTACGTGCGCTTGATGCGCTGCTCGACTATCAGGACTACCCGAT 157793 Query 42052 TGCGGCGGCTCTG---AAAGCTAAACAGCGTCGTTCTCTGGGCGTTGGTATCACCAACTA 42108 |||| || | | || | |||||| ||||||| | || ||| |||||| Sbjct 157792 CCCGGCTGCCCAGCGTGGCGCGATGGGTCGTCGTACTCTGGGTATCGGCGTCATCAACTA 157733 Query 42109 TGCTTCGTGGTTGGC-AAGTAACTATTGCGACTACTCAGAAGCATACGCC---GG--AAA 42162 || | | |||| ||| | |||| |||||| || | |||| || | Sbjct 157732 CGCCTACTATCTGGCGAAGCATGGTGTGCG-CTACTCCGATGGCAGCGCCAATGGCCTGA 157674 Query 42163 CGTTCATGAACTGATGGAAGCGTTTCAATATAACCTGTTGGTTGCCTCTATGGAACTGGC 42222 || || || || | |||||| |||| ||| ||||| || ||||| | || ||||| Sbjct 157673 CGCACAAGACCT--TTGAAGCGATTCAGTATTACCTGCTGAAAGCCTCAAATGAGCTGGC 157616 Query 42223 GAAAGAACGCGGTGCATGTGGACTGTTCCATGAAACAAAATATGCACAAGGGCTGTTACC 42282 |||||| | ||||| || |||| ||||||| | ||||| || || | | || Sbjct 157615 GAAAGAGCAAGGTGCCTGCCCGTGGTTCAATGAAACCACCTATGCGCAGGGCATTCTGCC 157556 Query 42283 GATCGATTGGTACTGCAAAACCGTGGATGAACTC-GC--GTTACCTGTGTATAATTGCGA 42339 ||||| ||| ||| |||| | || || ||| || || ||| Sbjct 157555 TATCGACACCTACAAGAAAGATCTGGACGCGATCAGCAACGAACCGCTG---CATCTCGA 157499 Query 42340 TTGGGAATGGTTGCGCGACGAAATCAAAAAATATGGCTTGCGTAACTCAACTCTTTCCGC 42399 |||||| | |||| || || || |||| | ||| |||| ||||| || || || || Sbjct 157498 CTGGGAAAGCCTGCGTGAAGAGATTAAAACGCACGGCCTGCGCAACTCGACCCTGTCTGC 157439 Query 42400 TTTAATGCCATGTGAGAGTAGTTCTCAAGTAAGCAACTCAACAAACGGGATTGAACCGCC 42459 | ||||| | ||| | || || | ||| | || ||||| ||||| || || Sbjct 157438 GCTGATGCCGTCTGAAACCTCGTCGCAGATCTCCAATGCCACCAACGGTATTGAGCCTCC 157379 Query 42460 TCGCGGTCCTGTGAGTGTGAAATCTTCGAAAGAAGGTTCATTCAAC--CAGGTAGTACCG 42517 ||||||| | || | ||| | || ||||| || ||| | | ||||| || ||| Sbjct 157378 GCGCGGTCACATCAGCATCAAAGCGTCAAAAGATGG--CATCCTGCGTCAGGTCGTGCCG 157321 Query 42518 AACCA-GAACGATCAGATTGATTTCTATGATTATCTCTGGACAATGGCAAAACGCGGTAA 42576 | | || || || || ||| || || || ||| |||| | || || Sbjct 157320 GAGTATGAGCG-TCTGAAAGATCAGTACGAACTGCTGTGGGAAATGCCGAA------CAA 157268 Query 42577 TAAAGGTTATCTGTCTCATGTTGCTGTTATGCAGAAGTTTGTTGATCAAGCGATCTCTGC 42636 | || || ||| | || | | | |||||||| || | || || ||||| || | Sbjct 157267 CGACGGCTACCTGCAACTGGTGGGTCTGATGCAGAAATTCATCGACCAGGCGATTTCGTC 157208 Query 42637 AAACACCAACTATGATCCGGCTAACTTCCCAGATGGTAAAGTGAAATCTGAAAC-CATCA 42695 ||||||||||| |||||| | |||| | | ||||||||| |||||| | Sbjct 157207 CAACACCAACTACGATCCGTCGCGCTTCACCAACGGTAAAGTG-CCGATGAAACAGCTGC 157149 Query 42696 TTGATGACCTGCTTTATGCGAACTACTACGGCGTGAAAACTCTGTATTATCACAACACCC 42755 | | || ||||| ||| | | | |||||||||||| || || ||||| ||||||| Sbjct 157148 TGAAAGATCTGCTGACGGCGTATAAGTTCGGCGTGAAAACGCTCTACTATCAAAACACCC 157089 Query 42756 GCGACGGTGCAGGTGAAGA 42774 | |||||||| |||||| Sbjct 157088 GTGACGGTGC---TGAAGA 157073 Score = 87.8 bits (96), Expect = 2e-12 Identities = 208/312 (67%), Gaps = 2/312 (1%) Strand=Plus/Minus Query 42944 CAAAAACATCGCGTATTCGAAACTTTGACTGAAAAACAACTATCATTCTTCTGGCGACCG 43003 |||||| || | | || |||| ||| ||||| || || || ||||||||||| ||| Sbjct 156840 CAAAAATATGACATCTTTGAAAAGCTGATCGAAAAGCAGCTCTCCTTCTTCTGGCGTCCG 156781 Query 43004 GAAGAAGTGGATCTGTCGATCGACCGTATGCAGTATGCAAAAATGCCGGAACACGAGAAA 43063 ||||| || || | || ||| || || | || ||||||| || || ||| Sbjct 156780 GAAGAGGTCGACGTTTCACGCGATCGCATCGATTACCAGGCGCTGCCGGATCATGAAAAA 156721 Query 43064 ATCATTTTTGATTCTAACCTGCAATATCAAACCCTGTTAGATACCATTCAGGGACGTGGC 43123 || ||| |||||| | ||||| || ||| | ||| | |||||||| || || Sbjct 156720 CATATCTTTATCAGCAACCTGAAGTATCAGACGCTGCTGGATTCGATTCAGGGCCGCAGC 156661 Query 43124 CCTAACCTGGCGTTTCTCCCGATTGCCTCTGATGTTTCAA-TGGAAACGTGGATCGAAAC 43182 || ||| | ||| | || ||| | ||| ||| | || ||||||| ||||| ||||| Sbjct 156660 CCGAACGTCGCGCTGCTGCCGCTGATCTC-GATTCCTGAACTGGAAACCTGGATTGAAAC 156602 Query 43183 ATGGGCTTTCAGTGAAACAATTCATAGCCGCAGTTATACACACATTCAGCGTAACTTGCA 43242 ||||| ||| || || ||||| ||| ||| || ||||| |||||| | Sbjct 156601 CTGGGCGTTCTCAGAGACGATTCACTCCCGTTCTTACACCCACATCATCCGTAACATTGT 156542 Query 43243 TATCGACCCGGC 43254 || ||| ||||| Sbjct 156541 TAACGATCCGGC 156530 >seq3 Length=630259 Score = 174 bits (192), Expect = 2e-38 Identities = 568/870 (65%), Gaps = 12/870 (1%) Strand=Plus/Minus Query 154149 GCCCGTGCATACATTGAGTATCGCCACGATCGCGATATTGCCCGTGAACAGAAAAGCAAA 154208 ||||| || |||||||| || ||||||||||||||| | ||||| || | | ||| | Sbjct 230075 GCCCGCGCCTACATTGAATACCGCCACGATCGCGATGTCGCCCGCGATCGTCAGAGCCAG 230016 Query 154209 CTGTTTACGGATATCTCCAGTATGGTGAATCTGTCCAATAAAGAGATCACCAACGAGAAC 154268 | | | || | | |||| ||| | ||||| | | | |||||||| Sbjct 230015 TTACATCACGCCATTCGCGGACTGGTCGATCAGACCAATGCGGCGCTGCTGAACGAGAAT 229956 Query 154269 GCGAACAAAGAC-GCAAGGGTTTTCCCGACACAGCGCGATCTGTTGGCGGGTATCGTAGC 154327 || ||||||||| |||| | | ||||||| |||||||||||| |||| || ||||| || Sbjct 229955 GCCAACAAAGACAGCAAAG-TGATCCCGACGCAGCGCGATCTGCTGGCCGGGATCGTGGC 229897 Query 154328 GAAACACTTCGCACGTAACCACATTCTACCAAAACACATCGTAGAAGCGCATGATTCTGG 154387 ||||||| ||||| | || || || || | | || ||||| || || Sbjct 229896 AAAACACTACGCACAGCAGCAGATCCTGCCGCGCGATGTGGTGCTGGCGCACGAGCGCGG 229837 Query 154388 TGATATCCATTATCATGATCTGGATTACAGCCCGTTC-ACGCCATACACAAACTGCTGTC 154446 || ||||| ||||| ||||| || ||| ||| ||| | | || | |||||| | Sbjct 229836 CGAGATCCACTATCACGATCTCGACTACTCCCCTTTCTTCCCGATGTTC-AACTGCATGC 229778 Query 154447 TGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAGACATCGAAC 154506 || | ||| ||||||| |||||| | || || ||||| ||||| || || || ||||| | Sbjct 229777 TGATCGATCTGAAAGGCATGCTGACCAACGGTTTCAAAATGGGCAATGCTGAGATCGAGC 229718 Query 154507 CCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCACAGATTGCTT 154566 | || ||||| |||| || || || | | ||| ||||||| ||| ||| | || Sbjct 229717 CGCCTAAATCGATCGCCACCGCCACCGCCGTGACGGCGCAGATCATCGCGCAGGTCGCCA 229658 Query 154567 CTCACCAGTACGGCGGGACAACCTTTGCAAACG--TTGATAAAGTGCTGGCTCCGTATGC 154624 || |||||||| || ||| || || || ||||| |||||||||| |||| || Sbjct 229657 GCCATATTTACGGCGGCACCACCATT--AACCGTATTGATGAAGTGCTGGCCCCGTTTGT 229600 Query 154625 AGAAATGACATATGAAAAGCATGTTAAGGATGCTAAAAAGTATAAAATTTCGTTGGATCG 154684 || || |||| |||| | | |||| | ||| | || || || || Sbjct 229599 TGAGCAGAGCTATGCCCGGCATCTGGCGATTGCTGAGCAGTGGCAGATCCCGCAGG-CCG 229541 Query 154685 TACA-TATGCGATGGAAAAGACTGAAAAAGATGTG-TTTGATGCTTTCCAATCGTATGAA 154742 || |||||| | || || ||||| ||| | || || || || ||| ||| Sbjct 229540 AGCAGTATGCGCGCCAGCGTACGGAGAAAGA-GTGCTACGACGCCTTTCAGTCGCTGGAA 229482 Query 154743 TACGAAGTTAACACGCTGCATACTGCCAACGGACAAACACCTTTCGTTACTATTACTTTC 154802 || || || || || ||||| || |||||||| || || || || || || || ||| Sbjct 229481 TATGAGGTGAATACCCTGCACACCGCCAACGGCCAGACGCCGTTTGTCACCTTTGGTTTT 229422 Query 154803 GGTACTGGTACGGGAATGTTTGAACGAATGATCCAGAAAGCGATTCTGAAAAACCGTATT 154862 ||| || |||| | | || |||| ||| | |||||||| ||||| | Sbjct 229421 GGTCTGGGGACGGACTGGGCGGCCCGGCTGATTCAGCAGTCGATTCTGCTTAACCGGCTG 229362 Query 154863 CGTGGTCTGGGTAAACAAGGTATTACCCCTGTGTTCCCTAAACTGGTCATGTTTATGGAA 154922 || ||||||||| | | | || | ||||||||||||||||| | || Sbjct 229361 GCCGGACTGGGTAAAAATCGCAAGACGGCGGTGTTCCCTAAACTGGTGTTCAGCATTCGC 229302 Query 154923 AAAGGTGTAAACATGAATCCTGGGGATCGTAACTATGACATCAAACAATTGGCTCTGGAA 154982 |||| || ||| | || || ||| || || ||||||||| |||| ||||| Sbjct 229301 GAAGGCGTCAACCGCCGGGCGGGCGACGTTAATTACGATATCAAACAACTGGCGCTGGAG 229242 Query 154983 TGCGCTTCGAAACGTATGTACCCAGATATC 155012 ||||| || || ||||| || || ||| Sbjct 229241 TGCGCCAGCAAGCGGATGTATCCCGACATC 229212 >seq13 Length=199142 Score = 165 bits (182), Expect = 9e-36 Identities = 144/179 (80%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 51018 GTTGAAGGTGGACAGCACCTAAACGTGAATGTGCTACGTCGCGAAACCCTGAAAGATGCT 51077 ||||||||||||||||| || ||||| || || || || |||||||| ||| ||||||| Sbjct 145509 GTTGAAGGTGGACAGCATCTGAACGTCAACGTTCTGCGCCGCGAAACGCTGGAAGATGCA 145450 Query 51078 GTGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGCGTTTCAGGTTATGCAGTTCGC 51137 || ||||||||||| || || || ||| | || |||||||||||||| ||||| || || Sbjct 145449 GTTAAACATCCTGAAAACTATCCGCAGCTGACTATCCGCGTTTCAGGCTATGCCGTGCGT 145390 Query 51138 TTTAATGCACTGACTCCAGAACAACAGCGCGACGTTATCGCCAGAACCTTTACGGAAAG 51196 ||||| |||| || || || || ||||||||||| || || | |||||||| ||||| Sbjct 145389 TTTAACTCACTCACGCCTGAGCAGCAGCGCGACGTGATTACCCGTACCTTTACTGAAAG 145331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569973819346440