Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq174 140 9e-29 >seq174 Length=42168 Score = 140 bits (154), Expect = 9e-29 Identities = 227/318 (71%), Gaps = 9/318 (3%) Strand=Plus/Minus Query 39442 TGAACTGTATGTGGAAGATGGCTACAACATCCGCGACGTGGACCAGGCGCACGTTGAAGA 39501 ||| |||||||| ||| | ||||||||||| || | || ||| | || || || || Sbjct 32248 TGAGCTGTATGTAGAAACTAATTACAACATCCGTGATATCGATCAGACTCATGTCGAGGA 32189 Query 39502 ATTCCGCGATGCGTACCTGGCCGGTGAATATGTGCCGCCGCTGACCGTGGAAGTGACGCA 39561 || ||||| || | | | || |||||| | ||||| |||||| | || | || || | Sbjct 32188 GTTTCGCGACGCCTTCATCGCTGGTGAACACGTGCCTCCGCTGGCTGTTAAGGTCACCGA 32129 Query 39562 GCAGGGCATCAAGGTGATTGATGGCCACCACCGCTTTGCCGGTGCAAAGATGGCCGCAGA 39621 ||||||| ||| | || |||||||| ||||||| | |||||||||| ||| | ||| Sbjct 32128 AAAGGGCATTAAGATCATCGATGGCCATCACCGCTATTACGGTGCAAAGCTGG-CTCAGG 32070 Query 39622 AACCGGCCTGGA-ACTGCGCCTGGAAGTG-AACGACATCACCGGCACCAGTGAGGCTGAC 39679 || ||| || | |||||||| | |||| || ||| || || |||||| || ||| Sbjct 32069 AAGCGGGCTATACGCTGCGCCTTG-AGTGTAAGGACTTCGTGGG---CAGTGAAGCCGAC 32014 Query 39680 AAAATCGCGCTGATGGTCACCAGCAGCCAGGG-CAAGCCGCTGGAACCGCTGGAACGCGC 39738 | | || | ||||||||||| || ||||| | |||| ||| ||||||||||| || Sbjct 32013 AGCGTGGCATTCATGGTCACCAGTAGTCAGGGCCGAGCC-CTGTTGCCGCTGGAACGTGC 31955 Query 39739 CAAAGCCTATTCGCGCCT 39756 |||||| |||||| Sbjct 31954 AGCCGCCTATCAGCGCCT 31937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135391359323114