Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_025452.1 Length=155346 Score E Sequences producing significant alignments: (Bits) Value seq1 196 5e-45 >seq1 Length=970878 Score = 196 bits (216), Expect = 5e-45 Identities = 297/423 (70%), Gaps = 0/423 (0%) Strand=Plus/Plus Query 26857 CAGGCGCTCAAACATCACGCGGTTGATCTGAATACCGTAGTCGATGCGACGTTCGCGGTT 26916 |||||||| | |||||| ||||| ||| | ||| ||||| ||| |||| ||||||| Sbjct 158251 CAGGCGCTGATACATCAGCTTGTTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTT 158310 Query 26917 CTCTTCTGTTCCACGGTTGTTCTTCAGGACAACGACGTCATCGAACTGGTAGTGCCACAG 26976 |||| ||||||||||||||||| || | | | |||| | ||||||| Sbjct 158311 GCCTTCAACACCACGGTTGTTCTTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACAT 158370 Query 26977 AGGGATGTACCCTGTCGCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGACTTGAGCGC 27036 ||| | || || ||||| ||||| |||| |||||||||||| || ||||| | ||| Sbjct 158371 CGGGTAGAACAGCGTGGCTGCGCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGC 158430 Query 27037 CCCAGTGAGATACTTGATGAACGGGATCAGGCCTGTATGAACCATCTCTCCGCCGCGAAT 27096 || || |||| ||||||||| ||| ||||| | | || ||||||||||| Sbjct 158431 GGTCTGGAAATGCTTGTAGAACGGGATACAGCCGGTATGGAACGCTTCACCGCCGCGAAT 158490 Query 27097 AGGACTACCAATACCACGGATTGCCCCGAAGTCAAAACCGATACCAGCGCGTTTGGACAC 27156 || || || | ||||||| ||| || | |||||| || || || | || || Sbjct 158491 CGGGCTGCCCAGCGCACGGATACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGAC 158550 Query 27157 ATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTCTTGAT 27216 ||| | || || | ||| || |||||||| ||||||||| |||| || || ||| Sbjct 158551 ATATTTCACAATTGCGCTGGAGGTGGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGAT 158610 Query 27217 CAACACACATGAGCTGAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGGGGTTGG 27276 || |||||| |||||||||||||| || || || || || || | |||||| || || || Sbjct 158611 CAGCACACAGGAGCTGAACTGACGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGG 158670 Query 27277 AAG 27279 || Sbjct 158671 CAG 158673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496939634243440