Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_025830.1 Length=120938 Score E Sequences producing significant alignments: (Bits) Value seq13 194 1e-44 seq4 129 5e-25 seq2 114 1e-20 >seq13 Length=199142 Score = 194 bits (214), Expect = 1e-44 Identities = 148/175 (85%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 109107 GTGGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGC 109166 |||| || ||||||||||| ||||||||||| || ||||| ||||||||||||||||| | Sbjct 145502 GTGGACAGCATCTGAACGTCAACGTTCTGCGCCGCGAAACGCTGGAAGATGCAGTTAAAC 145443 Query 109167 ATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACT 109226 |||| ||||| |||||||||||||| ||||| || || || ||||| || || ||||||| Sbjct 145442 ATCCTGAAAACTATCCGCAGCTGACTATCCGCGTTTCAGGCTATGCCGTGCGTTTTAACT 145383 Query 109227 CTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAGAGTCT 109281 | || || || || |||||||||||||| || | |||||||||||||| ||||| Sbjct 145382 CACTCACGCCTGAGCAGCAGCGCGACGTGATTACCCGTACCTTTACTGAAAGTCT 145328 >seq4 Length=447486 Score = 129 bits (142), Expect = 5e-25 Identities = 76/79 (96%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 9581 ATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACCTGCTCTA 9640 ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 299304 ATTTGGTGGCCCCTGCTGGGTTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTA 299245 Query 9641 ACCACTGAGCTAAGGGGCC 9659 ||||||||||||||||||| Sbjct 299244 ACCACTGAGCTAAGGGGCC 299226 >seq2 Length=722220 Score = 114 bits (126), Expect = 1e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 109109 GGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGCAT 109168 ||||| || || |||||||||||| || || |||| ||| ||||| | | ||| Sbjct 515222 GGTCAGCACCTCAACGTTAACGTTATGAACCGTGAAATGCTGCTGGATGCGATGGAACAT 515163 Query 109169 CCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCT 109228 || || ||||||||||| |||||||| || || |||||||| || || ||||||||||| Sbjct 515162 CCAGAGAAATATCCGCAACTGACCATTCGCGTTTCCGGTTACGCTGTGCGCTTTAACTCA 515103 Query 109229 CTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAG 109276 |||||| || ||||||| || || || | || ||||| ||| || Sbjct 515102 CTGACTAAAGAGCAGCAGCAGGATGTGATTACCCGAACCTTCACTAAG 515055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 386846769776491