Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_026607.2 Length=159914 Score E Sequences producing significant alignments: (Bits) Value seq4 134 1e-26 seq1 113 5e-20 >seq4 Length=447486 Score = 134 bits (148), Expect = 1e-26 Identities = 77/79 (97%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 62446 ATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTA 62505 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 299304 ATTTGGTGGCCCCTGCTGGGTTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTA 299245 Query 62506 ACCACTGAGCTAAGGGGCC 62524 ||||||||||||||||||| Sbjct 299244 ACCACTGAGCTAAGGGGCC 299226 >seq1 Length=970878 Score = 113 bits (124), Expect = 5e-20 Identities = 265/400 (66%), Gaps = 0/400 (0%) Strand=Plus/Plus Query 133262 TTGATTTGCAGACCATAGTCTAGATGACGAATACGGTTTTCATCTACGCCTTTGTTGTTC 133321 |||| || | ||||||||| | ||||| | ||||| | || || || ||||||| Sbjct 158273 TTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACCACGGTTGTTC 158332 Query 133322 TTTAATACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCA 133381 || | |||| |||| |||| | || ||||||||||| || || | || || ||||| Sbjct 158333 TTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAGCGTGGCTGCG 158392 Query 133382 CCACCACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAA 133441 || ||||| || ||||| |||||||| || || || || ||||| ||||| || |||| Sbjct 158393 CCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAATGCTTGTAGAAC 158452 Query 133442 GGAATTACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATC 133501 || || ||| ||||| |||| || | ||| ||| || || || Sbjct 158453 GGGATACAGCCGGTATGGAACGCTTCACCGCCGCGAATCGGGCTGCCCAGCGCACGGATA 158512 Query 133502 ATACCGGCGTTGATGCCGATACCAGCTCGCTTGCTGATATACTTAATAATACTGTTACTT 133561 |||||||||||| ||||| || || |||| || ||| || | ||| | | Sbjct 158513 CGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTTCACAATTGCGCTGGAG 158572 Query 133562 GCCGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGA 133621 | || || || || | ||| ||||| || || | ||||| || || |||||| Sbjct 158573 GTGGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGCACACAGGAGCTGAACTGA 158632 Query 133622 CGAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCA 133661 || || || || || | || | ||| || || || |||| Sbjct 158633 CGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCA 158672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511556070499760