Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_027119.1 Length=157498 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=970878 Score = 95.1 bits (104), Expect = 1e-14 Identities = 285/434 (66%), Gaps = 12/434 (3%) Strand=Plus/Minus Query 60071 CTTCCAACACCTATTATGTCCGGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGTA 60130 || || || || || ||||| ||||| |||||||| || || ||||||||||| ||||| Sbjct 158673 CTGCCGACGCCAATCATGTCTGGCGTACGCACCCCAACACGTCAGTTCAGCTCCTGTGTG 158614 Query 60131 TTGATCAAAACTGGTGATACATTGGACTCAATTAATGCCACTGCGAAAAGCATCGTGGAT 60190 ||||| | || || | ||||||| || || ||||| | | || ||| | Sbjct 158613 CTGATCGAGTGCGGCGACAGCCTGGACTCCATCAACGCCACCTCCAGCGCAATTGTGAAA 158554 Query 60191 TATGTTTCCAAACGTGCTGGCATCGGATTCGATGTTGGGGCAATTCGTGGCATCGGTAGC 60250 ||||| || | ||||| |||||||| || | | || || |||| | || ||| Sbjct 158553 TATGTCTCTCAGCGTGCCGGCATCGGTATCAACGCCGGTCGTATCCGTGCGCTGGGCAGC 158494 Query 60251 CCTATCCGTAAAGGGGAAATGGTCCATACAGGTCTG-GTTCCATTCATCAAGTATTT--- 60306 || || || || ||| | ||||||| || ||| | || ||| |||| |||| Sbjct 158493 CCGATTCGCGGCGGTGAAGCGTTCCATACCGG-CTGTATCCCGTTCTACAAGCATTTCCA 158435 Query 60307 GACTGGTGCCCTGAAGTCTTGCTCTCAAGGCGGTATCCGTGGTGGATCGGCAACATGCTA 60366 ||| || ||||||| || ||||| ||||| | ||||| || | || || ||| Sbjct 158434 GAC---CGCGGTGAAGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGC--CACGCTG 158380 Query 60367 TGTT--CCCATCTGGCATTATCAATTTGATGATGTCGTTGTTCTCAAAAACAACCGTGGA 60424 | | || || |||||| || | || | | || || || ||||||||||| Sbjct 158379 TTCTACCCGATGTGGCATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGT 158320 Query 60425 TTGGAAGAGAACCGTGAACGCCGTATCGACTATGGGATTCAGATTAACCGCGTCATGTTC 60484 | |||| ||||| | || | || |||||||| | ||| | ||| | |||| Sbjct 158319 GTTGAAGGCAACCGCGTGCGTCACATGGACTATGGTGTACAGCTCAACAAGCTGATGTAT 158260 Query 60485 GAGCGCCTGGTGAA 60498 |||||||| |||| Sbjct 158259 CAGCGCCTGCTGAA 158246 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 132825 TCTGGCGACGATGGCAGGACTTGAACCTGCGACATACGGTTTAACAGACCGCCGTTCTAC 132884 |||||| | || | ||||| ||||| | ||||||||| ||||||| |||||||||||| Sbjct 403654 TCTGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCTAC 403713 Query 132885 CGACTGAACTACA 132897 ||||||||||||| Sbjct 403714 CGACTGAACTACA 403726 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 132825 TCTGGCGACGATGGCAGGACTTGAACCTGCGACATACGGTTTAACAGACCGCCGTTCTAC 132884 |||||| | || | ||||| ||||| | ||||||||| ||||||| |||||||||||| Sbjct 479395 TCTGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCTAC 479454 Query 132885 CGACTGAACTACA 132897 ||||||||||||| Sbjct 479455 CGACTGAACTACA 479467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503825485999920