Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_027340.1 Length=162160 Score E Sequences producing significant alignments: (Bits) Value seq1 230 2e-55 >seq1 Length=970878 Score = 230 bits (254), Expect = 2e-55 Identities = 292/402 (73%), Gaps = 0/402 (0%) Strand=Plus/Plus Query 58355 GTTGATCTGAACACCGTAGTCAGTACGGCGCTCGCGGTTGTTCTCAATACCACGGTTGTT 58414 ||||| ||| ||||| ||||| | | ||| |||||||| |||| |||||||||||| Sbjct 158272 GTTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACCACGGTTGTT 158331 Query 58415 CTTCAGCACGATCATGTCATCGAACTGGAAGTGCCACATCGGGTAATACATGGTTGCTGA 58474 ||||||||| | || | |||| | | |||||||||||||| ||| || |||| Sbjct 158332 CTTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAGCGTGGCTGC 158391 Query 58475 GCCGCCACGGATACCACCCTGAGAACAGCTCTTCAGATCACCAACGAACTTCTTGATGAA 58534 ||||||||| | || |||||||||||| ||||| | ||| | |||| ||| Sbjct 158392 GCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAATGCTTGTAGAA 158451 Query 58535 CGGGATCGTACCGGTATGAGTCATCTCACCGTCGCGGATAGAGGAACCCAGGGCACGGAT 58594 |||||| |||||||| | |||||| |||| || | | ||||| |||||||| Sbjct 158452 CGGGATACAGCCGGTATGGAACGCTTCACCGCCGCGAATCGGGCTGCCCAGCGCACGGAT 158511 Query 58595 AGCGCCGAAGTCAACACCGATACCAGCACGCTTAGACACGTATTTCACGATTGCGGTGCC 58654 | ||| || | |||||| || ||||||| ||| || |||||||| |||||| || Sbjct 158512 ACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTTCACAATTGCGCTGGA 158571 Query 58655 AGTAGCAGTAATGCTGTCCAGGGTGTCACCAGACTTGATCAGGACACATGAGCTGAACTG 58714 || || | ||| ||||||| |||| || ||| |||||| ||||| ||||||||||| Sbjct 158572 GGTGGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGCACACAGGAGCTGAACTG 158631 Query 58715 ACGGGTACGGGTACGCACGCCTGCCATGATAGGTGTTGGGAG 58756 ||| || |||| || ||||| | |||||| || || || || Sbjct 158632 ACGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCAG 158673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518742698308800