Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_027344.1 Length=158099 Score E Sequences producing significant alignments: (Bits) Value seq4 134 1e-26 seq1 107 2e-18 >seq4 Length=447486 Score = 134 bits (148), Expect = 1e-26 Identities = 77/79 (97%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 103765 ATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTA 103824 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 299304 ATTTGGTGGCCCCTGCTGGGTTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTA 299245 Query 103825 ACCACTGAGCTAAGGGGCC 103843 ||||||||||||||||||| Sbjct 299244 ACCACTGAGCTAAGGGGCC 299226 >seq1 Length=970878 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 14844 TTGATTTGCAGACCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTC 14903 |||| || | ||| || || | ||||| | |||||| | || ||||| ||||||| Sbjct 158273 TTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACCACGGTTGTTC 158332 Query 14904 TTTAATACCAAAAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCA 14963 || | |||| ||| |||| | || ||||||||||| || || | || || ||||| Sbjct 158333 TTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAGCGTGGCTGCG 158392 Query 14964 CCACCACGGACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAA 15023 || ||||| || ||||| |||||||| || || || || ||||| ||||| || |||| Sbjct 158393 CCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAATGCTTGTAGAAC 158452 Query 15024 GGAATTACGCCAGTATG 15040 || || ||| ||||| Sbjct 158453 GGGATACAGCCGGTATG 158469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505748532889160