Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_027348.2 Length=73882 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 2e-13 >seq4 Length=447486 Score = 89.7 bits (98), Expect = 2e-13 Identities = 137/186 (74%), Gaps = 11/186 (6%) Strand=Plus/Minus Query 21682 CTGCAAACTCTATCAGCGCA-GCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCA 21740 |||| | |||||||||||| | || ||||| ||||||||| |||| || |||||||||| Sbjct 111760 CTGCCAGCTCTATCAGCGCTCGTGC-GACATCTTCCTGGGCCTGCCGTTTAACATCGCCA 111702 Query 21741 GCTACGCGCTGCTGACGCACCTCATGGCGGC-CA-CGGT-CGGCATGCAGGCCGAGAAGT 21797 |||| ||| ||||| | || | |||| ||| || | || || |||||| | | | Sbjct 111701 GCTATGCGTTGCTG--GTACAT-ATGGTGGCGCAGCAGTGCGATCTGCAGGTGGGCGACT 111645 Query 21798 TCATCTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGGC---CAAGC 21854 || ||||| | |||||||| |||||| ||| ||||| |||| ||||| | || Sbjct 111644 TCGTCTGGACCGGCGGTGATACCCACCTCTACAGTAACCATCTGGAGCAGGCGCGCCTGC 111585 Query 21855 AGCTGA 21860 |||||| Sbjct 111584 AGCTGA 111579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236279258063387