Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq4 145 1e-29 >seq4 Length=447486 Score = 145 bits (160), Expect = 1e-29 Identities = 204/284 (72%), Gaps = 2/284 (1%) Strand=Plus/Minus Query 197613 TGAAACAATATCTTGAGATGATGCAGAACATTCTGGACGAGGGTCATGTTAAAGGC-GAT 197671 ||||||| ||||| || | ||||| | | ||| |||| || || | ||| || || Sbjct 112238 TGAAACAGTATCTGGATTTAATGCAACATGTGCTGCACGAAGG-CACGCCAAAAGCTGAC 112180 Query 197672 CGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCGTAAA 197731 ||||| || || || |||||||| | ||||| | |||||||||||| || ||| | Sbjct 112179 CGTACCGGCACCGGTACGCTTTCAATTTTTGGTCACCAGATGCGTTTCAATCTGCAGGAT 112120 Query 197732 GGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACTGCTG 197791 ||||| ||| | ||||| || |||||| || | || || ||||| ||||| |||||| Sbjct 112119 GGTTTTCCGCTGGTCACCACCAAGAAATGTCATATCCGCTCGATTATTCATGAGCTGCTG 112060 Query 197792 TGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATTTGG 197851 ||||| || | || |||||||||| | ||||| |||| ||| ||| |||| ||| Sbjct 112059 TGGTTTCTGAAAGGCGATACCAACATCGGTTATCTCAAAGAAAACAACGTCTCCATCTGG 112000 Query 197852 CGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCCCCTGTATGG 197895 |||||| ||||| ||||| | || ||||| ||||||| Sbjct 111999 GATGAGTGGGCGGATGAGAATGGCGATCTCGGCCCGGTGTATGG 111956 Score = 143 bits (158), Expect = 4e-29 Identities = 197/273 (72%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 198329 CTTTCATGTCAGCTCTATCAACGCA-GTGCGGATTTTTTCCTCGGCGTGCCGTTCAACAT 198387 || || || ||||||||||| ||| ||||| | | ||||| ||| ||||||| ||||| Sbjct 111765 CTCTCCTGCCAGCTCTATCAGCGCTCGTGCG-ACATCTTCCTGGGCCTGCCGTTTAACAT 111707 Query 198388 CGCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGA 198447 ||| || || || || || || ||||| || |||||| | || | |||||| Sbjct 111706 CGCCAGCTATGCGTTGCTGGTACATATGGTGGCGCAGCAGTGCGATCTGCAGGTGGGCGA 111647 Query 198448 TTTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCT 198507 ||| | ||||| |||||||| || || |||||| ||| |||||||||||||| || Sbjct 111646 CTTCGTCTGGACCGGCGGTGATACCCACCTCTACAGTAACCATCTGGAGCAGGCGCGCCT 111587 Query 198508 CCAGCTGACGCGTGAGCCGTTACCTTTACCGAAACTGATCATCAAGCGTAAACCGGAATC 198567 |||||||| || || ||| || | || ||| | ||||| || ||||||| || Sbjct 111586 GCAGCTGACCCGCGAACCGCGTCCGCTGCCATCACTTGTTATCAAACGCAAACCGGCGTC 111527 Query 198568 TATCTTCGATTATAAATTCGAAGATTTTGAGAT 198600 | || || ||| | ||||||||||||||||| Sbjct 111526 GCTGTTTGACTATCAGTTCGAAGATTTTGAGAT 111494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769132362574520