Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq17 239 4e-58 seq2 95.1 1e-14 >seq17 Length=169126 Score = 239 bits (264), Expect = 4e-58 Identities = 212/265 (80%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 58077 GCACGCTACAGCTGATTAAAGAACACGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAA 58136 |||| || || | || ||||| || ||||| |||||||| ||||| || |||||||| | Sbjct 132360 GCACCCTGCAAATCATCAAAGAGCATGGCTGCAAAGCGGGTCTGGTGTTTAACCCGGCGA 132419 Query 58137 CGCCGCTCAGTTATCTCGATTACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCCG 58196 | ||||| || || ||||||||||||||||| || |||||| | || ||||||||||| | Sbjct 132420 CCCCGCTGAGCTACCTCGATTACGTCATGGATAAGCTGGATATCATTCTGCTGATGTCAG 132479 Query 58197 TGAACCCAGGCTTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACTGCGCGAAG 58256 ||||||| ||||| ||||| ||||| |||||||| || |||||||||||||| |||| Sbjct 132480 TGAACCCCGGCTTTGGCGGTCAGTCATTTATTCCTGGCACACTGGATAAACTGCGTGAAG 132539 Query 58257 TGCGTCGCCGCATTGATGCGTCCGGTTACGACATTCGCCTGGAAGTGGACGGCGGCGTGA 58316 ||| | || || ||| | ||||||| ||||||||| |||||||| |||||||||| Sbjct 132540 CGCGCAGGCGTATCGATCAGAGCGGTTACAGCATTCGCCTTGAAGTGGATGGCGGCGTGA 132599 Query 58317 AGGTGAACAATATCGGCGAGATCGC 58341 || | |||| || ||| ||||||| Sbjct 132600 AGATCGACAACATTGGCCAGATCGC 132624 >seq2 Length=722220 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 59615 ATGCACCCTTAGTTCAATTGGATAGAGCAACGGTCTTCTAAATCGTTAGTTACAGGTTCG 59674 |||| ||||||| ||| |||||||||||| ||| ||||||| ||| || ||||||||| Sbjct 220810 ATGCGCCCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCG 220869 Query 59675 AATCCTGTAGGGTGTACCAAAT 59696 |||||||||||| |||||| || Sbjct 220870 AATCCTGTAGGGCGTACCATAT 220891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471204083278120