Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_028659.1 Length=142987 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 4e-14 >seq4 Length=447486 Score = 93.3 bits (102), Expect = 4e-14 Identities = 196/287 (68%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 101369 TCTGGTAGGTGGCGCTGTTCGTGATGGTCTGCTGGGTCGTCCAGTTCATGACCGTGATTA 101428 ||| || || || || || ||||||| |||||| || || ||| ||| |||| Sbjct 287820 TCTTGTTGGCGGTGCGGTGCGTGATGCGCTGCTGAATCTGCCGGTTACAGACAAAGATTG 287879 Query 101429 CGTGGTTGTGGGTGCAACACACGAAGAGATGATTGAAAAAGGTT-TCACCCAGGTTGG-C 101486 ||||| ||| | || | ||||| ||| |||| | || | ||||| |||| || | Sbjct 287880 GGTGGTGACAGGTTCCACGCCCGAAGCCATGCTTGAGCAGGGCTATCACC-AGGTCGGTC 287938 Query 101487 GCTGCTTTCCCGGTGTACTTGCATCCTGAAACCAAAGAAGAATACGCACTGGCCCGTACT 101546 || ||||||| | | || |||||| | | ||||| || || ||||| ||||| Sbjct 287939 GCGATTTTCCCGTTTTCCT-GCATCCCGTCAGTCGCGAAGAGTATGCGCTGGCACGTACC 287997 Query 101547 GAGCGTAAAACTGGTGAAGGCCATACTGGCTTTGAGACCTTCTTCAGCCCGGATGTAACT 101606 ||||| |||| || ||||| | || || |||| |||| | | || || || || Sbjct 287998 GAGCGGAAAAACGGGAAAGGCTACACCGGTTTTGTCACCTGGTCCGCGCCCGACGTGACG 288057 Query 101607 CTGGAAGAGGATTTATCGCGTCGTGACCTGACGATCAATGCGATGGC 101653 ||||| |||| ||| ||| || || ||||| ||||||||||| || Sbjct 288058 CTGGAGCAGGACTTACAGCGCCGCGATCTGACCATCAATGCGATTGC 288104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457393982822280