Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_028699.1 Length=40740 Score E Sequences producing significant alignments: (Bits) Value seq174 174 4e-39 >seq174 Length=42168 Score = 174 bits (192), Expect = 4e-39 Identities = 213/291 (73%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 24312 TTGGCGAATTTTCCGCTCATGATTTTCGGCGTACACTGGCAACCAGACTTTCAGAAGAAG 24371 |||| || ||| |||||||||| || || | || |||| || | | |||| |||| Sbjct 40985 TTGGTGATTTTACCGCTCATGACTTCCGCAGAACGATGGCTACTCGTTTAGCAGAGGAAG 40926 Query 24372 GTATAGCTCCGCATGTTATTGAGAAAATGTTGGGGCATGAGCTGGGCGGCGTACTTTCTG 24431 | || || || ||||| |||||||||||| |||||||||| || || || || ||| | | Sbjct 40925 GGATTGCGCCCCATGTCATTGAGAAAATGCTGGGGCATGACCTTGGAGGAGTGCTTGCAG 40866 Query 24432 TTTATAACAAACATGACTGGATTGCTGAACAGAAAGCCGCCTATGAGCTGTACGCTGAAA 24491 |||||||||| || || ||| | || ||||| || | || ||||| || |||||||| | Sbjct 40865 TTTATAACAAGCACGATTGGTTAGCGGAACAAAAGGTTGCTTATGAACTTTACGCTGACA 40806 Query 24492 AAATATTCTGGCATATCAGGAAGATTTCTGGTTGATCCCCCCGTTTAAGATCCACTGTAC 24551 | || || ||| |||| | ||| |||| || | || |||||||| |||||||| | Sbjct 40805 AGATTTTTGAGCAGATCAAGCTGATCTCTGATTAACGCCGCCGTTTAAAATCCACTGCTC 40746 Query 24552 CACCTCAGACTCAAGGTATTGTTTGGGGTGAGTTCGGATTGGTTTTGGAAA 24602 ||||||| | | ||||| ||| ||| || ||| | |||||| || || Sbjct 40745 TACCTCAGCCAGTAAGTATTTTTTTGGGCGATTTCTTACTGGTTTGGGGAA 40695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130236549220556