Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_028754.1 Length=120098 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-17 seq13 102 6e-17 >seq2 Length=722220 Score = 104 bits (114), Expect = 2e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 30093 ATTACATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTG 30152 |||||| | || ||| || || || |||| || || | ||| || || |||||||| Sbjct 515045 ATTACAGTGACTTAGTGAAGGTTCGGGTAATCACATCCTGCTGCTGCTCTTTAGTCAGTG 515104 Query 30153 CGTTAAAACGTACAGCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGAT 30212 |||||| || |||||||| || ||||| || || || | ||| || ||||| || |||| Sbjct 515105 AGTTAAAGCGCACAGCGTAACCGGAAACGCGAATGGTCAGTTGCGGATATTTCTCTGGAT 515164 Query 30213 GTTTCTGTGCATCCAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTC 30272 ||| | ||||||| ||| ||||| | | || || || || ||||||||||| | Sbjct 515165 GTTCCATCGCATCCAGCAGCATTTCACGGTTCATAACGTTAACGTTGAGGTGCTGACCGC 515224 Query 30273 CCTCGAT 30279 | ||||| Sbjct 515225 CTTCGAT 515231 >seq13 Length=199142 Score = 102 bits (112), Expect = 6e-17 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 30106 AGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCGTTAAAACGTAC 30165 |||||| ||||| |||| |||||| ||| || ||| | || |||| ||||||||| || Sbjct 145336 AGTAAAGGTACGGGTAATCACGTCGCGCTGCTGCTCAGGCGTGAGTGAGTTAAAACGCAC 145395 Query 30166 AGCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGATGTTTCTGTGCATC 30225 || || |||||||| |||||||| | || || || |||||||||||||| |||||| Sbjct 145396 GGCATAGCCTGAAACGCGGATAGTCAGCTGCGGATAGTTTTCAGGATGTTTAACTGCATC 145455 Query 30226 CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTCCCTC 30276 ||| || || | | || ||||| || || ||||| || || || Sbjct 145456 TTCCAGCGTTTCGCGGCGCAGAACGTTGACGTTCAGATGCTGTCCACCTTC 145506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384158978424931