Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq13 183 3e-41 seq2 132 5e-26 >seq13 Length=199142 Score = 183 bits (202), Expect = 3e-41 Identities = 148/179 (83%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 101917 TTGAAGGTGGTCAACACCTGAACGTTAACGTTTTGCGTCGTGAAACTCTGGAAGATGCAG 101976 |||||||||| || || |||||||| |||||| |||| || ||||| ||||||||||||| Sbjct 145508 TTGAAGGTGGACAGCATCTGAACGTCAACGTTCTGCGCCGCGAAACGCTGGAAGATGCAG 145449 Query 101977 TTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCT 102036 |||| ||||| ||||| |||||||||||||| ||||| || || || ||||| || || | Sbjct 145448 TTAAACATCCTGAAAACTATCCGCAGCTGACTATCCGCGTTTCAGGCTATGCCGTGCGTT 145389 Query 102037 TTAACTCTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTCACCGAGAGT 102095 ||||||| || || || || |||||||||||||| || | |||||||| || || ||| Sbjct 145388 TTAACTCACTCACGCCTGAGCAGCAGCGCGACGTGATTACCCGTACCTTTACTGAAAGT 145330 >seq2 Length=722220 Score = 132 bits (146), Expect = 5e-26 Identities = 133/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 101916 ATTGAAGGTGGTCAACACCTGAACGTTAACGTTTTGCGTCGTGAAACTCTGGAAGATGCA 101975 || ||||| ||||| ||||| |||||||||||| || ||||||| ||| ||||| Sbjct 515231 ATCGAAGGCGGTCAGCACCTCAACGTTAACGTTATGAACCGTGAAATGCTGCTGGATGCG 515172 Query 101976 GTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGC 102035 | | ||||| || ||||||||||| |||||||| || || |||||||| || || ||| Sbjct 515171 ATGGAACATCCAGAGAAATATCCGCAACTGACCATTCGCGTTTCCGGTTACGCTGTGCGC 515112 Query 102036 TTTAACTCTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTCAC 102088 |||||||| |||||| || ||||||| || || || | || |||||||| Sbjct 515111 TTTAACTCACTGACTAAAGAGCAGCAGCAGGATGTGATTACCCGAACCTTCAC 515059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534626233680160