Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq3 107 6e-19 >seq3 Length=630259 Score = 107 bits (118), Expect = 6e-19 Identities = 227/333 (68%), Gaps = 8/333 (2%) Strand=Plus/Minus Query 37927 ACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATG 37986 || || ||||| |||| ||||| ||||||| |||||| || ||| |||||| || | Sbjct 615839 ACCGCAGCCATAAACTCAGCCGGATAGTGCGCCTTCAGCCACAACGTCTGGTAGGAGACG 615780 Query 37987 AGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACG 38046 ||| |||| ||||||||||| | |||||| ||| | || || || || | | | || Sbjct 615779 AGTGCGTAGGCCGCAGAGTGTGACTTGTTAAAGCCATAACCTGCAAATTTTTCTACCAGA 615720 Query 38047 TCCCACACCGCCCGGATGG-CAGC-CTCCGAGTAGCCTCGCTCGCTCGCCCCCTTCTGGA 38104 || | | | | || | ||| | ||| | | | | ||| | || || | Sbjct 615719 TCGAAGATCTTC---ATCGACAGTTCCCCGTCGATGCCCATACTTTCGGCACCGTCGCGG 615663 Query 38105 AGTTCACGAACTCC--TTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAG 38162 | | || |||| | ||||||| | ||||||| ||||| || |||||||||||||| || Sbjct 615662 AATACA-GAACGCTGTTTGGCCATCTCCTCGGGTTTCTTTTTACCCATGGCGCGACGCAG 615604 Query 38163 GAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTC 38222 | || || || || ||||| |||| || | ||| || || | |||||| || Sbjct 615603 CATATCCGCACCGCCCAGCGTGTAACCGGAGAGAACCTGGGCGATCTGCATCACCTGTTC 615544 Query 38223 CTGGTAGATGATGAGCCCGAAGGTCGGGTCCAG 38255 ||| |||| ||||| ||| ||||||| ||||| Sbjct 615543 CTGATAGAGGATGATGCCGTAGGTCGGTTCCAG 615511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159703120439958