Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_028894.1 Length=170336 Score E Sequences producing significant alignments: (Bits) Value seq1 149 7e-31 >seq1 Length=970878 Score = 149 bits (164), Expect = 7e-31 Identities = 286/415 (69%), Gaps = 10/415 (2%) Strand=Plus/Plus Query 140759 CATCAGGTTATTCAACTGGACACCATAGTCCATATGCCTGATACGGTTTTCTTCAACGCC 140818 |||||| || || | ||| |||||||||||||| || | | ||||| ||||||| || Sbjct 158263 CATCAGCTTGTTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACC 158322 Query 140819 TTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATA-ATAAG 140877 |||||||||||| || || | |||| | ||||| |||||| || || || | || Sbjct 158323 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAG 158382 Query 140878 CAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAAT 140937 | || || ||||||||||| | || || || ||||| || || || || || ||||||| Sbjct 158383 C-GTGGCTGCGCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAAT 158441 Query 140938 GTTTCCAGAACGGAATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCG---AAC 140994 | || ||||||| ||| || ||||| ||||||| ||| ||| | Sbjct 158442 GCTTGTAGAACGGGATACAGCCGGTATGGAACGCTTCACC---GCCGCGAATCGGGCTGC 158498 Query 140995 CTTCAGCACGAATCATGCCAACGTTGATACCGATACCTGCACGCTTACTGATATATTCGA 141054 | ||||| || || ||||||||||||| || ||||||| | || ||||| | Sbjct 158499 CCAGCGCACGGATACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTTCA 158558 Query 141055 TGATTGAATTAGCAGTCTTATTGATTGACTTCAGGGAGTCAGCCGC-TTCGATAACCACG 141113 |||| | | || ||||| || | |||| ||| ||||| ||||| | ||| Sbjct 158559 CAATTGCGCTGGAGGTGGCGTTGATGGAGTCCAGGCTGTC-GCCGCACTCGATCAGCACA 158617 Query 141114 CAGGAACTGAACTGTCTTGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCA 141168 ||||| |||||||| | ||| || || | |||| | |||||| || || |||| Sbjct 158618 CAGGAGCTGAACTGACGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCA 158672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544903815391040