Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_028957.1 Length=171541 Score E Sequences producing significant alignments: (Bits) Value seq1 147 2e-30 >seq1 Length=970878 Score = 147 bits (162), Expect = 2e-30 Identities = 288/417 (69%), Gaps = 14/417 (3%) Strand=Plus/Plus Query 142832 CATCAAGTTATTCAACTGGACGCCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCC 142891 ||||| || || | ||| || ||||||||||| || | | |||||| ||||||| || Sbjct 158263 CATCAGCTTGTTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACC 158322 Query 142892 CTTGTTGTTCTTCAGAACGAGCAAATTTTCAACTTCCAAATGCCATAAAGGATA-ATAAG 142950 |||||||||||| || |||| |||| | ||||| |||||| | || || | || Sbjct 158323 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAG 158382 Query 142951 CAGTAGCAGCGCCGCCCCGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAAT 143010 | || || |||||||| || | || || || |||||||| || || || || ||||||| Sbjct 158383 C-GTGGCTGCGCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAAT 158441 Query 143011 GTTTCCAGAACGGAATAACACCAGTATG--ACGAACTTCACCCATACCGATTTTCG---A 143065 | || ||||||| ||| || ||||| ||| ||||||| ||| ||| Sbjct 158442 GCTTGTAGAACGGGATACAGCCGGTATGGAACG--CTTCACC---GCCGCGAATCGGGCT 158496 Query 143066 ACCTTCAGCACGAATCATACCAACGTTGATGCCGATACCCGCACGCTTACTGATATATTC 143125 || ||||| || ||| ||||||| ||||| || ||||||| | || ||||| Sbjct 158497 GCCCAGCGCACGGATACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTT 158556 Query 143126 GATGATTGAATTGGCAGTCTTATTGATTGACTTCAGGGAGTCTGCAGC-TTCGATAACCA 143184 | |||| ||| || ||||| || | |||| ||| || || ||||| | || Sbjct 158557 CACAATTGCGCTGGAGGTGGCGTTGATGGAGTCCAGGCTGTC-GCCGCACTCGATCAGCA 158615 Query 143185 CGCAGGAACTGAACTGCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCa 143241 | ||||| |||||||| || || || || | |||| | |||||| || || |||| Sbjct 158616 CACAGGAGCTGAACTGACGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCA 158672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548759508405240