Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq3 105 2e-18 >seq3 Length=630259 Score = 105 bits (116), Expect = 2e-18 Identities = 229/335 (68%), Gaps = 12/335 (4%) Strand=Plus/Minus Query 38360 ACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATG 38419 || || ||||| |||| ||||| ||||||| |||||| || ||| |||||| || | Sbjct 615839 ACCGCAGCCATAAACTCAGCCGGATAGTGCGCCTTCAGCCACAACGTCTGGTAGGAGACG 615780 Query 38420 AGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACG 38479 ||| |||| ||||||||||| | |||||| ||| | || || || || | | | || Sbjct 615779 AGTGCGTAGGCCGCAGAGTGTGACTTGTTAAAGCCATAACCTGCAAATTTTTCTACCAGA 615720 Query 38480 TCCCACACCGCCCGGATGG-CAGCGTCCGAGTAGCCTCGCTCGCTT---GCTCCCTTCTG 38535 || | | | | || | ||| ||| || | | | ||| || || | | Sbjct 615719 TCGAAGATCTTC---ATCGACAGT-TCCCCGTCGATGCCCATACTTTCGGCACCGTCGCG 615664 Query 38536 GAAGTTCACGAACTCC--TTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGG 38593 ||| | || |||| | ||||||| | ||||||| ||||| || |||||||||||||| Sbjct 615663 GAA-TACA-GAACGCTGTTTGGCCATCTCCTCGGGTTTCTTTTTACCCATGGCGCGACGC 615606 Query 38594 AGAAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGC 38653 || | || || || || ||||| |||| || | ||| || || | |||||| Sbjct 615605 AGCATATCCGCACCGCCCAGCGTGTAACCGGAGAGAACCTGGGCGATCTGCATCACCTGT 615546 Query 38654 TCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAG 38688 ||||| |||| ||||| ||| ||||||| ||||| Sbjct 615545 TCCTGATAGAGGATGATGCCGTAGGTCGGTTCCAG 615511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160227880748350