Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_029091.1 Length=168771 Score E Sequences producing significant alignments: (Bits) Value seq13 181 1e-40 seq2 113 5e-20 seq1 84.2 2e-11 >seq13 Length=199142 Score = 181 bits (200), Expect = 1e-40 Identities = 142/170 (84%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 123123 CAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCCA 123182 || ||||||||||| ||||||||||| || ||||| || |||||||||||||| ||||| Sbjct 145497 CAGCATCTGAACGTCAACGTTCTGCGCCGCGAAACGCTGGAAGATGCAGTTAAACATCCT 145438 Query 123183 GAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTTAACTCTCTG 123242 ||||| |||||||||||||| ||||| || || || ||||| || || |||||||| || Sbjct 145437 GAAAACTATCCGCAGCTGACTATCCGCGTTTCAGGCTATGCCGTGCGTTTTAACTCACTC 145378 Query 123243 ACTCCGGAACAGCAGCGCGACGTTATCGCTCGCACCTTTACTGAGAGTCT 123292 || || || |||||||||||||| || | || ||||||||||| ||||| Sbjct 145377 ACGCCTGAGCAGCAGCGCGACGTGATTACCCGTACCTTTACTGAAAGTCT 145328 >seq2 Length=722220 Score = 113 bits (124), Expect = 5e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 123121 GTCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATC 123180 |||| || || |||||||||||| || ||||||| || ||||| | | |||| Sbjct 515221 GTCAGCACCTCAACGTTAACGTTATGAACCGTGAAATGCTGCTGGATGCGATGGAACATC 515162 Query 123181 CAGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTTAACTCTC 123240 |||| ||||||||||| |||||||| || || || ||||| || || ||||||||||| | Sbjct 515161 CAGAGAAATATCCGCAACTGACCATTCGCGTTTCCGGTTACGCTGTGCGCTTTAACTCAC 515102 Query 123241 TGACTCCGGAACAGCAGCGCGACGTTATCGCTCGCACCTTTACTGAG 123287 ||||| || ||||||| || || || | || ||||| ||| || Sbjct 515101 TGACTAAAGAGCAGCAGCAGGATGTGATTACCCGAACCTTCACTAAG 515055 >seq1 Length=970878 Score = 84.2 bits (92), Expect = 2e-11 Identities = 189/282 (67%), Gaps = 4/282 (1%) Strand=Plus/Minus Query 42018 CAATTATTGAATATATTTCTAAACGAGCTGGTATCGGTATCAACGTTGGTATGCTTCGTG 42077 ||||| | ||||| | ||| | || || || ||||||||||||| ||| | |||| Sbjct 158564 CAATTGTGAAATATGTCTCTCAGCGTGCCGGCATCGGTATCAACGCCGGTCGTATCCGTG 158505 Query 42078 CAGAAGGTTCTAAGATCGGTATGGGTGAAG--TTCGACATACGGGTGTTATTCCATTCTG 42135 | || ||| | ||||||| ||| ||||| || ||| || |||| Sbjct 158504 CGCTGGGCAGCCCGATTCGCGGCGGTGAAGCGTTC--CATACCGGCTGTATCCCGTTCTA 158447 Query 42136 GAAACATTTCCAAACTGCAGTAAAATCTTGTTCTCAAGGTGGTATTCGTGGTGGTGCTGC 42195 || |||||||| || || || || || |||||||| || || ||||||| || || || Sbjct 158446 CAAGCATTTCCAGACCGCGGTGAAGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGC 158387 Query 42196 TACAGCGTATTATCCGATGTGGCACTTAGAAGTAGAGAACCTATTAGTTCTGAAAAATAA 42255 || || || ||||||||||| | ||| | || | ||| | || ||||| || || Sbjct 158386 CACGCTGTTCTACCCGATGTGGCATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAA 158327 Query 42256 CAAAGGCGTGGATGAAAACCGTATTCGACATATGGACTACGG 42297 | || || || | ||||| | || || |||||||| || Sbjct 158326 CCGTGGTGTTGAAGGCAACCGCGTGCGTCACATGGACTATGG 158285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539896214090440