Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq9 120 1e-22 seq3 104 7e-18 >seq9 Length=205880 Score = 120 bits (132), Expect = 1e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31267 GCCGAGCAGTTCCAGGTTCTTCACCTTGTCCGGCCATTTGATCTTCTTGAGGATTCCGAC 31326 ||||||||||||||| ||| | || ||||||||||| || ||||| || ||||| ||||| Sbjct 7222 GCCGAGCAGTTCCAGATTCCTGACTTTGTCCGGCCACTTAATCTTTTTCAGGATACCGAC 7281 Query 31327 CGCCGCGCGGGAGTCGCCCTTGCCCTCGAACATCTCGGCCAGGTCGAAGCCGCTGAGGTA 31386 | | |||| |||||| ||| || |||||||| ||||| ||||| ||||| ||||| Sbjct 7282 CATCTCGCGCTCTTCGCCCCGGCCTTCAAACATCTCAGCCAGATCGAATCCGCTCAGGTA 7341 Query 31387 CTGGCGCCAGGCCTTGGGCCACTGGCTCAGCGGGCGCAGGGTCAGGTCATCATTGACAAT 31446 ||||||| | ||||| || | || | | || |||||| | | || Sbjct 7342 TCGGCGCCATGAGGCTGGCCATTGCGATACAGGTTTGATGCGCATGTCATCTGTCATGAT 7401 Query 31447 GTCCAGGAGGTCCATCTGATCGATCTCCTCCAGGCG 31482 ||| || | ||||||||| || ||||| |||||| Sbjct 7402 GTCGAGCACGTCCATCTGGTCAATCTCGATCAGGCG 7437 >seq3 Length=630259 Score = 104 bits (114), Expect = 7e-18 Identities = 105/134 (78%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 34044 GTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCC 34103 ||| || ||||| || || || | |||||||||| || || ||||||||||||| || Sbjct 42703 GTGGTAAACCTCATCGCGATAGATAAACATGATCAAATCCGCATCCTGCTCGATCGAGCC 42644 Query 34104 GGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGC-CGCTGCTCCAGGGAGCGGT 34162 || || ||||| ||||| | | ||| || || | |||| ||||||||||| ||||||| Sbjct 42643 CGATTCACGCAGATCCGAGTTGACCGGACGTTTAT-CGGCTCGCTGCTCCAGCGAGCGGT 42585 Query 34163 TGAGCTGCGACAGC 34176 | |||||||||||| Sbjct 42584 TAAGCTGCGACAGC 42571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160451863806810