Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq13 412 2e-110 >seq13 Length=199142 Score = 412 bits (456), Expect = 2e-110 Identities = 640/904 (71%), Gaps = 14/904 (2%) Strand=Plus/Plus Query 78263 GTGTGGGATCGACTCACCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGAC 78322 |||||| |||| |||||| ||||||||||| |||| ||||| || ||| | |||||||| Sbjct 180499 GTGTGGAATCGTCTCACCAGCAACTTCTGGCTGCCGGAGAAAGTGCCGCTCTCCAACGAT 180558 Query 78323 ATCCCATCCTGGGACACCCT---TACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTC 78379 | || |||| | || || || | | | || || || || || || |||||| Sbjct 180559 CTGCCCGGCTGGCAGACGCTGGATAAACAGCAGCAGCAG---CTGACCATCCGGGTGTTC 180615 Query 78380 ACCGGCCTCACCCTGCTCGACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCC 78439 |||||||| || || || |||||||||||| | | ||||| ||| || | Sbjct 180616 ACCGGCCTGACGCTACTTGACACCATCCAGAACGTGATCGGCGCGCCGGGGCTGATGGAA 180675 Query 78440 GACGCCAACACCCCGCACGAGGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTA 78499 || |||| |||||||| || ||||||||||| | || ||| || ||||| |||| Sbjct 180676 GATGCCATTACCCCGCATGAAGAGGCGGTGCTGTCGAATATCAGCTTTATGGAAGCGGTG 180735 Query 78500 CACGCCAAGTCCTACAGCTCGATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAG 78559 || ||| |||||||| |||||||||||||| || || | || || | | || | Sbjct 180736 CATGCCCGCTCCTACAGTTCGATCTTCTCAACCCTGTGTAACACCCAGGATGTGGATGCC 180795 Query 78560 GCGTTCCGTTGGTCGGAGGAGAACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGAC 78619 || | | ||| || ||||| | | |||||| |||||| | ||| ||||||| Sbjct 180796 GCTTATCAGTGGAGCGAAGAGAATGCGCCGCTGCAGAACAAGGCACGCATCATCCTGGAA 180855 Query 78620 TACTACCGCGGCGACGACCCCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTC 78679 |||||| | ||| || || ||||| |||| | ||||| |||||||| || Sbjct 180856 CACTACCAGGCCGATGATCCGCTGAAGAAGAAGATCGCCAGCGTTTTCCTGGAGTCGTTT 180915 Query 78680 CTCTTCTACTCGGGCTTCTACCTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAAC 78739 | ||||| || ||||||| ||||||||||||||||||||||| | ||||||||| ||| Sbjct 180916 TTGTTCTATTCCGGCTTCTGGCTGCCGATGTACTGGTCGAGCCGTGGCAAGCTGACCAAC 180975 Query 78740 ACCGCGGACGTGATCCGGTTGATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGA 78799 ||||| ||| |||| || ||||||| || || || || || || || ||||||||||| Sbjct 180976 ACCGCTGACCTGATTCGCCTGATTATTCGCGATGAGGCGGTGCACGGTTACTACATCGGT 181035 Query 78800 TACAAGTACCAGCGAGGC-CTCG-AGACCCAG-GGGCCGGCGCGGCAGGCTGAGCTCAAG 78856 ||||| || |||| |||| || | | | | | | | |||| || | ||||| || Sbjct 181036 TACAAATATCAGC-AGGCGCTGGCTGCCGCTGACGATCTGCGCCGC--GAAGAGCTGCAG 181092 Query 78857 GAGTACACGTTCGATCTGCTCTCGGAGCTCTACGACAACG-AGTGTGACTACACCGAGCA 78915 ||| | | | |||||||| || ||| || || |||| |||| | || |||||| Sbjct 181093 CAGTTCGCCTATGATCTGCTGCTGGCGCTGTATGAGAACGAAGTG-GCTTATACCGAGGC 181151 Query 78916 GCTCTATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAA 78975 |||||||| ||| || || ||||| || || | ||||||| |||||||| ||| Sbjct 181152 GCTCTATGCCGATGTTGGCTGGGTAGAGGAGGTGAAAACCTTCCTGCACTACAACGCCAA 181211 Query 78976 CAAGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGACCATGGCAGA 79035 ||| ||| ||||||| || ||||| || || |||||||| ||| ||| || | Sbjct 181212 CAAAGCGTTGATGAATCTGGGCTATGAGGCGCTGTTCCCGGCGGAGCTGACAGCGGTGAA 181271 Query 79036 CCCGGCCATCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGG 79095 |||||||| |||| || || || || || |||||| |||||||||||||||||||| Sbjct 181272 TCCGGCCATTCTGTCGGCTCTGTCGCCCAACGCCGACGAAAACCACGACTTCTTCTCCGG 181331 Query 79096 GTCGGGCTCGAGCTACGTCATCGGCAAAGCTGAAGCCACGGCAGATGAGGACTGGGACTT 79155 || ||||| ||| || || || ||||| | | || | ||||||||||||| | || Sbjct 181332 TTCAGGCTCCTCCTATGTGATGGGAAAAGCGGTCGAAACCGAAGATGAGGACTGGAATTT 181391 Query 79156 CTGA 79159 |||| Sbjct 181392 CTGA 181395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299298366002642