Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_030931.1 Length=41871 Score E Sequences producing significant alignments: (Bits) Value seq174 484 2e-132 >seq174 Length=42168 Score = 484 bits (536), Expect = 2e-132 Identities = 578/782 (74%), Gaps = 2/782 (0%) Strand=Plus/Minus Query 26856 GCCGCAGCGCCTTCCTGGCATCGACGTGATGCCGAAGCAGCGCCTGTTCATTCGCGACCT 26915 ||| ||||| || || || || ||| || ||||| ||||| ||||||||||| || || Sbjct 17798 GCCACAGCGACTGCCGGGAATTGACCAGACACCGAAACAGCGTCTGTTCATTCGTGATCT 17739 Query 26916 GATCGCTCCGGGGCGCACCACTTCGCCGGCGATCTTCTGGGTTCAACAGACCGGCTTCAC 26975 |||||| ||||| |||||| || | || | | || | ||||| |||||||| Sbjct 17738 GATCGCGCCGGGCCGCACCCAGTCCAACACTATTTATTACGTGAAGCAGACGGGCTTCAC 17679 Query 26976 CAACGCCGCCGCAGTCGTGCCGGAGAACACCGCGAAGCCGTACAGCAGCATCACGTTCGG 27035 || || ||||| || ||||| || ||||| ||||| |||||| || | || | Sbjct 17678 TAATAATGCAGCAGTTGTACCGGAAAATACCGCCAAGCCTTACAGCGATATTAAATTTGC 17619 Query 27036 CACCAAGATCACCCCGGTGACCACCATCGCGCACATGTTCAAGGCGTCCAAGCAGATCCT 27095 | | | ||||| ||| ||| || || ||||||||||| || || |||||||| || Sbjct 17618 CGAAGAAACTACCCCTGTGCGCACGATTGCCCACATGTTCAAAGCTTCAAAGCAGATTCT 17559 Query 27096 TGATGACTTCGCTCAACTGCAGTCGACCGTGGACACCGAGATGCGCTTCGGCCTGAAGTA 27155 ||||| ||||| || |||||||| || || || | || ||||||| || |||||||| Sbjct 17558 GGATGATTTCGCACAGCTGCAGTCAACGGTTGATGCTGAAATGCGCTATGGACTGAAGTA 17499 Query 27156 TGTCGAAGAGCAGGAGATCCTGTTCGGCGATGGCACCGGCGCGCACCTCGACGGCATCGT 27215 || ||||||||||| || |||||||| |||||||||||||| || || | |||||| | Sbjct 17498 CGTTGAAGAGCAGGAAATTCTGTTCGGTGATGGCACCGGCGCACATCTGAAAGGCATCAT 17439 Query 27216 GCCGCAAGCCTCTGCGTTCAGCGCCGCCTTCGCGGTCGAGCAGCAGAACGGTATCGATGA 27275 ||||| || | ||||||| || || || || || || | | | |||||| |||| Sbjct 17438 CCCGCAGGCAACAGCGTTCAATGCGGCTTTTGCCGTGGAAAAAGAAACCGGTATTGATGT 17379 Query 27276 CCTGCGCCTGGCGATGCTGCAGGCCCAGCTGGCGCGCCTGCCGGCATCCGGCCACGTTCT 27335 ||||| ||||| ||||||||||| || |||||||| | ||||| || |||||||| || Sbjct 17378 GCTGCGACTGGCAATGCTGCAGGCGCAATTGGCGCGCTTCCCGGCGTCGGGCCACGTCCT 17319 Query 27336 GCACTTCATCGACTGGGCGAAGATCGAGCTGACCAAGGACACCCTGGGCCGCTACATCCT 27395 |||||| | ||||||||| || || || | || || ||||||||||||||||| Sbjct 17318 GCACTTTACCGACTGGGCACGTATTGAATTGTCGAAAGATGAACTGGGCCGCTACATCCT 17259 Query 27396 CGCCAA-CCCGCTGGGCCTGGCCGGCCCGCTGCTGTGGGGCCTGCCGGTGGTTGCCACTG 27454 || || || ||| | || | ||| || ||||||||||||||||| || |||| Sbjct 17258 GGCGAATCCTGCTCAG-CTTACTACCCCAACACTCTGGGGCCTGCCGGTGGTGGCAACTG 17200 Query 27455 AAATCGCCGCGTTCCAGGGCAAGTTCCTGACTGGTGCGTTCCAGACCGGCGCGCAGATCT 27514 || ||| ||||| || || ||||||||||| ||||| | |||| || ||| | | Sbjct 17199 AAGCCGCGCAGTTCCTCGGTAAATTCCTGACTGGGGCGTTTAACTCCGGTGCTCAGTTGT 17140 Query 27515 TCGATCGCGAAGACGCCAACGTGGTGATCTCCACCGAGAACGCCGACGACTTCGAGAAGA 27574 | |||||||| || |||||||| || ||||| | ||| |||||||| ||||| ||||||| Sbjct 17139 TTGATCGCGAGGATGCCAACGTAGTTATCTCAAGCGAAAACGCCGATGACTTTGAGAAGA 17080 Query 27575 ACATGATCTCGATCCGTTGCGAAGAGCGCCTGGCGCTGGCCGTGAAGCGCCCCGAGGCGT 27634 |||||||||| ||||| || ||||| ||| | ||||| || || | || || || |||| Sbjct 17079 ACATGATCTCAATCCGCTGTGAAGAACGCGTTGCGCTTGCGGTCTATCGTCCGGAAGCGT 17020 Query 27635 TC 27636 || Sbjct 17019 TC 17018 Score = 408 bits (452), Expect = 1e-109 Identities = 815/1201 (68%), Gaps = 10/1201 (1%) Strand=Plus/Minus Query 24132 CCGATCATGGTAGGCCTCTGATGGGCGACAAAAAGAAACCCGGGCGGTTCAAGTCCGCCT 24191 ||||| ||| |||| ||||||| |||||||| || ||| | || |||| Sbjct 20387 CCGATAATGATAGGTGTCTGATGAAATCTAAAAAGAAGCCGGGGGCAATTAAAAGCGCCC 20328 Query 24192 TGCTCGATTGGCTCGGAGTGCCTATCGGATTGACCGACGGCGCGTTCTGGCAGGAGTGGT 24251 | || | ||||| || || || ||| | |||| ||| | |||||| |||| |||| Sbjct 20327 TCCTGAACTGGCTTGGTGTACCCATCAGCCTGACTACAGGCACATTCTGGGAGGAATGGT 20268 Query 24252 TCGG-AACCTCGGCGAGCGGAAAGAACGTGACCGTCGATAAGGCCTTGCAGCTCTCGACG 24310 |||| || | || |||||||||| ||| | || ||||| || | ||| || | Sbjct 20267 TCGGGAAAAGCAGC-AGCGGAAAGACGGTGTCAGTGGATAAAGCGATAATGCTTTCAGCA 20209 Query 24311 GTATGGGCGTGCGTGCGGCTTCTCTCGGAGTCGGTGTCCACGCTGCCGCTGAAACTCTAC 24370 || |||||||| | ||| |||||| ||||| || || ||||| || || || |||| Sbjct 20208 GTCTGGGCGTGTGCGCGCCTTCTCAGTGAGTCCGTCTCTACGCTTCCCCTCAAGGTCTAT 20149 Query 24371 CGGCGCCTTCCGGACGGCTCCCGCGAGCAGGCCAAGGATCATCCG-CTGTTCAGGCTGCT 24429 ||| ||||| || || || ||| || | |||||| || || | | || Sbjct 20148 AAGCGAGAAAAAGACGGTTCACGAACGCTGGCGCAGCAGCATCCGGCTTATCGCGTT-CT 20090 Query 24430 TTGCCGTACGCCGAATGCCGAGATGACCCCGCAGCGCTTCATGCTGATGGTGGTGGCGAG 24489 || ||| ||||| || |||||||| || || ||||||||| |||| || || Sbjct 20089 GTGTAAGCAGCCAAATGCAGAAATGACCCCATCCCGGTTTATGCTGATGCTGGTAGCAAG 20030 Query 24490 CATCTGCCTGCGTGGAAACGCCTTCGTCGAGAAGAAGATGATCGGCACTCGCGTTGTTGC 24549 ||||| ||||||||||| || ||| |||| |||| | |||| || | |||| | Sbjct 20029 TATCTGTCTGCGTGGAAATGCTTTCATCGAAAAGATGGTGATAGGTAAAAAACTTGTCGG 19970 Query 24550 GCTTGTCCCGTTGCTGCCTCAGTACATGCGGGTGAAGCGCGAAGACAGCGGTCGCCTGAA 24609 ||| ||| || |||| ||| ||||| ||||||||| ||||| || | || | Sbjct 19969 CCTTAATCCGCTGTTGCCACAGAACATGAAGGTGAAGCGTTTAGACAATGGGCAGCTTGA 19910 Query 24610 GTACACCTACACCGAGAACGGTGTGGAGCGCGTCATTCCAGAGAAGAACCTGATGCACAT 24669 ||||||||||||||| || | | |||| || ||||| | | || | |||||||| Sbjct 19909 GTACACCTACACCGATAATCGCGGTAAGCGTGTTATTCCCGTCGATAAAATCATGCACAT 19850 Query 24670 CCGTGGCTTCGGCCTGGATGGCGTCTGCGGCATGCTCCCGGTGACCATGGGCCGCGAAAT 24729 |||||| ||||| || |||||||| ||||||||| | || ||| || || || || | Sbjct 19849 CCGTGGGTTCGGTCTTGATGGCGTTTGCGGCATGATGCCCATGATGATTGGTCGTGATGT 19790 Query 24730 CTTCGGTTCGGCGATGTCTGCCGAGGAGGCCGCCGCCAAGGTGTTCGCCCAGGGCATGCA 24789 | || ||||| ||| | | || || | ||||| || | || | | ||||| || Sbjct 19789 GATTGGCTCGGCAATGGCGGTGGAAGAATCAGCCGCAAAAATTTTTGAAAACGGCATTCA 19730 Query 24790 GGCTTCCGGGATTCTCAGCGGTGATACGACTCTCACCCCGAAGCAGCGAGAAGATCTTCG 24849 | |||||| | |||| | | || | ||| | | ||||||| | | || Sbjct 19729 GAATTCCGGCTTCATCAGTTCTAAAACTGATATCAACGCTGAGCAGCGGGCAAGGCTGAA 19670 Query 24850 GGCCAGCCTGACCGCCTTCATGGGATCGCAGAACGCCGGAAAGATCATGGTTGCCGAGGC 24909 | |||| | | ||| | || || | || ||||||||| ||||||| || | Sbjct 19669 AAAGAACCTGTCAGACTTTGTCGGCTCTAAAAATGCCGGAAAGGTCATGGTGCTTGAAGG 19610 Query 24910 CGGCCTGAAGTACCAGGGGATCACGATGAACCCCGAAGCTGCGCAGATGCTGGAGTCGCG 24969 || | || || ||||| |||| |||||||| ||||| || |||||||| || | Sbjct 19609 CGACATGTCTTATCAGGGCGTCACAATGAACCCTGAAGCAGCACAGATGCTTGAAAGCAG 19550 Query 24970 GTCGTTCAACGTCGAGGAGATGTGTCGTTGGTTCCGCGTCCCGCCGTTCATGGTGGGGCA 25029 || |||| | || ||||| || || |||||||| | || || |||||||| || || Sbjct 19549 ATCATTCAGTATTGAAGAGATTTGCCGGTGGTTCCGTATTCCTCCCTTCATGGTCGGTCA 19490 Query 25030 CATGGACAAGCAGTCCAGCTGGGCCAGCTCTGTGGAGGCGCAGAACCTCCACTTCCTGAC 25089 || || ||| ||||||||| ||| |||| |||||| || |||||||| Sbjct 19489 TGCAGATAAACAGAGCAGCTGGGCATCGAGTGTCGAGGGTATGAACCTTCAGTTCCTGAC 19430 Query 25090 CAATAGCCTCCGGCCGCTGCTGGTGAACATCGAGCAGGAGATCACGCGCTGTCTGATCGG 25149 |||| || || ||| ||||||| || ||||||||||| || | ||||| ||| | Sbjct 19429 TAATACGCTGCGACCGTTGCTGGTCAATATCGAGCAGGAAATTGCACGCTGCCTGCT--- 19373 Query 25150 CGAGGCCGATGCGGATGAGTTCTTCGCCGAGTTCGCAGTTGAGGGGCTGCTGCGCGCCGA 25209 ||| | |||| || || | || || |||||| | || ||||| ||||| || ||||| Sbjct 19372 CGATGGCGAT---GAAGATTATTTTGCTGAGTTCTCGGTAGAGGGTCTGCTTCGTGCCGA 19316 Query 25210 CAGCACCGCCCGTGCGGCTTGGTACAACACTGCACTGCAGAACGGCTGGATGAGCCGTAA 25269 |||| | |||| |||| | |||| || ||||| ||||| ||||||||| || || Sbjct 19315 CAGCGTAGGCCGTTCGGCATATTACACAACAGCACTTCAGAATGGCTGGATGTCACGAAA 19256 Query 25270 CGAGGTCCGTCGCCTGGAAAACCTGCCACCAATCGAAGGCGGGGATGTCTTCACCGTGCA 25329 ||| || || || ||||| || ||||||| |||||||| || ||| ||| ||| || || Sbjct 19255 CGATGTGCGCCGACTGGAGAATATGCCACCTATCGAAGGTGGTGATATCTACACGGTCCA 19196 Query 25330 G 25330 | Sbjct 19195 G 19195 Score = 163 bits (180), Expect = 8e-36 Identities = 277/401 (69%), Gaps = 3/401 (1%) Strand=Plus/Minus Query 25692 GAGAACAGCATCAGCATCTTCGACCCGATCGGGTACGACTGGTGGACTGGCGAGGGCGTC 25751 || |||||||||| ||| || || ||||| | ||||||||| || || || || Sbjct 18928 GAAAACAGCATCACCATTTTTGATGTTATCGGTGAGGACTGGTGG---GGTGACGGTGTA 18872 Query 25752 ACGGCCAAGCGCATCAGCGCCGCGTTGCGAGCCATGAAGGATGCCGACGTGGTGGTGAAC 25811 | |||| ||||| | || | | || | |||| | | ||| || || | Sbjct 18871 AGCGCCAGCCGCATTGCTGGCGTGCTTCGTTCACTGAACGGGGACGATGTCACTGTTTAT 18812 Query 25812 ATCAACAGCCCTGGCGGAGATGTCTTCGAGGGGCTGGCGATCTACAACCTGCTGCGCGAG 25871 |||||| ||||||||| ||| | || ||||| | |||||||||||||| || || ||| Sbjct 18811 ATCAACTCCCCTGGCGGCGATATGTTTGAGGGAGTTGCGATCTACAACCTTCTTCGTGAG 18752 Query 25872 CACAAGGGCAAGGTCACCGTACGCGTGCTCGGCCTGGCAGCTTCCGCAGCGTCGTTCATT 25931 ||| |||||||| || ||| | ||||||||||| ||||| || ||||| | ||| Sbjct 18751 TACAGCGGCAAGGTGACGGTAAAAATTCTCGGCCTGGCTGCTTCTGCGGCGTCAGTAATT 18692 Query 25932 GCCATGGCGGCCGATGAGGTGAAGATCGCCCGCGCCGGCTTCCTGATGATCCACAACGCC 25991 || ||||| | ||||| | |||||| || | | |||||||||||| ||||||||| Sbjct 18691 GCGATGGCCGGTGATGAAATTCAGATCGGGCGTGGTGCCTTCCTGATGATTCACAACGCC 18632 Query 25992 TGGACGATCGCCGCGGGTGACCGCAACGAGTTCAAGGAGGTGGCCAGCTTCCTGGAGCAG 26051 |||| || ||||| ||| || | ||||| ||| || || || || |||| Sbjct 18631 TGGATCATGGCCGCAGGTAACAGGAACGATTTCCGCGAATACGCTGACTATCTTGAGCCT 18572 Query 26052 ATCGACGGAACCCTGGCCGACATCTACTCGGTGCGCACCGG 26092 | ||| || | |||| || |||||| ||| ||| |||| Sbjct 18571 TTTGACAGAGCAATGGCAGATATCTACGCGGCCCGCTCCGG 18531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133855475493674