Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_030953.1 Length=170650 Score E Sequences producing significant alignments: (Bits) Value seq13 190 2e-43 seq2 127 2e-24 seq1 109 6e-19 >seq13 Length=199142 Score = 190 bits (210), Expect = 2e-43 Identities = 149/178 (84%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 9567 ACTCTCGGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAA 9626 ||| || ||||||||||| | || |||||||||||||| || || || || |||||||| Sbjct 145330 ACTTTCAGTAAAGGTACGGGTAATCACGTCGCGCTGCTGCTCAGGCGTGAGTGAGTTAAA 145389 Query 9627 GCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAAC 9686 || || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||| Sbjct 145390 ACGCACGGCATAGCCTGAAACGCGGATAGTCAGCTGCGGATAGTTTTCAGGATGTTTAAC 145449 Query 9687 TGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCA 9744 |||||||||||| ||||| || ||||||||||| |||||||| || || ||||||||| Sbjct 145450 TGCATCTTCCAGCGTTTCGCGGCGCAGAACGTTGACGTTCAGATGCTGTCCACCTTCA 145507 >seq2 Length=722220 Score = 127 bits (140), Expect = 2e-24 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 9574 GTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 9633 || ||||| || | || || || ||||||| || |||||| ||||||||||| || Sbjct 515059 GTGAAGGTTCGGGTAATCACATCCTGCTGCTGCTCTTTAGTCAGTGAGTTAAAGCGCACA 515118 Query 9634 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 9693 || |||||||| || || |||||||| ||||||||||| || ||||| | | ||||| Sbjct 515119 GCGTAACCGGAAACGCGAATGGTCAGTTGCGGATATTTCTCTGGATGTTCCATCGCATCC 515178 Query 9694 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTC 9743 ||| ||||||| || |||||||||||| ||||| ||||| ||||| Sbjct 515179 AGCAGCATTTCACGGTTCATAACGTTAACGTTGAGGTGCTGACCGCCTTC 515228 >seq1 Length=970878 Score = 109 bits (120), Expect = 6e-19 Identities = 204/295 (69%), Gaps = 6/295 (2%) Strand=Plus/Plus Query 88502 TTCAGTTGAACGCCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTT 88561 || || || || ||||| ||||| ||||| | |||||| |||| || || ||| || Sbjct 158273 TTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACCACGGTTGTTC 158332 Query 88562 TTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATA-AGCAGTAGCAGC 88620 |||| || || || |||| | ||||| |||||| || || || | ||| || || || Sbjct 158333 TTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAGC-GTGGCTGC 158391 Query 88621 GCCGCCACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAA 88680 ||||||||||| || ||||| ||||| || || || || ||||| ||||| || | || Sbjct 158392 GCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAATGCTTGTAGAA 158451 Query 88681 AGGAATAACACCAGTATG--ACGTACTTCACCCATGCCAATCTTAGAACCTTCGGCACGA 88738 || ||| || ||||| ||| ||||||| || |||| || ||||| Sbjct 158452 CGGGATACAGCCGGTATGGAACG--CTTCACCGCCGCGAATCGGGCTGCCCAGCGCACGG 158509 Query 88739 ATCATACCAACGTTAATACCAATTCCAGCGCGTTTGGAGATATACTCAACAATTG 88793 || ||| |||| ||||| || || || || | |||| ||| | ||||||| Sbjct 158510 ATACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTTCACAATTG 158564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545908535396400