Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq4 167 4e-36 seq83 91.5 2e-13 >seq4 Length=447486 Score = 167 bits (184), Expect = 4e-36 Identities = 227/317 (72%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349 || || || ||| | ||||||||| ||| ||||| | ||| |||||||||||||| Sbjct 111765 CTCTCCTGCCAGCTCTATCAGCGCTCGTGCGACATCTTCCTGGGCCTGCCGTTTAACATC 111706 Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAG 203409 ||| ||||| || ||| | ||||| || |||||| | | || || | || Sbjct 111705 GCCAGCTATGCGTTGCTGGTACATATGGTGGCGCAGCAGTGCGATCTGCAGGTGGGCGAC 111646 Query 203410 TTCGTCTGGACAGGCGGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTCTG 203469 ||||||||||| ||||||||||| || || || ||||||||||||||||| || ||| Sbjct 111645 TTCGTCTGGACCGGCGGTGATACCCACCTCTACAGTAACCATCTGGAGCAGGCGCGCCTG 111586 Query 203470 CAGTTAACTCGTGACCCGCACCCATTACCGCGTCTGAAATTCAAACGTAAGCCCGAGTCT 203529 ||| | || || || |||| || | || || ||||||| || || | ||| Sbjct 111585 CAGCTGACCCGCGAACCGCGTCCGCTGCCATCACTTGTTATCAAACGCAAACCGGCGTCG 111526 Query 203530 ATCTTCGACTACCAGTTCGAAGACTTTGAAATCGAAGGCTACGTTTCCCACGACGCCATC 203589 | || ||||| ||||||||||| ||||| || |||||||||| | | || ||| ||| Sbjct 111525 CTGTTTGACTATCAGTTCGAAGATTTTGAGATTGAAGGCTACGATCCGCATCCCGCGATC 111466 Query 203590 AAAGCACCGGTTGCCAT 203606 ||||| || || ||||| Sbjct 111465 AAAGCCCCTGTCGCCAT 111449 Score = 136 bits (150), Expect = 6e-27 Identities = 147/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 ||||||||||||||||| |||| || | || || ||||||||| || | ||| Sbjct 112182 GACCGTACCGGCACCGGTACGCTTTCAATTTTTGGTCACCAGATGCGTTTCAATCTGCAG 112123 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 || || || || ||||| ||||| || || ||| |||| || || ||||| |||||| Sbjct 112122 GATGGTTTTCCGCTGGTCACCACCAAGAAATGTCATATCCGCTCGATTATTCATGAGCTG 112063 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 |||||||| |||||||| || ||||||||| |||| || || || ||| ||| | ||| Sbjct 112062 CTGTGGTTTCTGAAAGGCGATACCAACATCGGTTATCTCAAAGAAAACAACGTCTCCATC 112003 Query 202729 TGGGACGAATGGGCG 202743 ||||| || |||||| Sbjct 112002 TGGGATGAGTGGGCG 111988 >seq83 Length=66758 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 2621 TTAGGGAAGTAGTTCAATTGGTAGAGCGTCGGTCTCCAAAACCGGTTGTTGGAGGTTCGA 2680 |||||| ||||||||||||||||||| |||||||||||||||| |||||| ||||||| Sbjct 66566 TTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGGGTTCGA 66507 Query 2681 GTCCTCTCTTCCCTGCCA 2698 |||| | |||||||| Sbjct 66506 GTCCCTCCGCCCCTGCCA 66489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788257239874000