Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031011.1 Length=168993 Score E Sequences producing significant alignments: (Bits) Value seq13 187 3e-42 seq2 131 2e-25 seq1 122 9e-23 >seq13 Length=199142 Score = 187 bits (206), Expect = 3e-42 Identities = 148/178 (83%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 126784 ACTCTCGGTAAAGGTACGAGCGATAACATCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAA 126843 ||| || ||||||||||| | || || ||||||||||| || || || || |||||||| Sbjct 145330 ACTTTCAGTAAAGGTACGGGTAATCACGTCGCGCTGCTGCTCAGGCGTGAGTGAGTTAAA 145389 Query 126844 GCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAAC 126903 || || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||| Sbjct 145390 ACGCACGGCATAGCCTGAAACGCGGATAGTCAGCTGCGGATAGTTTTCAGGATGTTTAAC 145449 Query 126904 TGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCA 126961 |||||||||||| ||||| || ||||||||||| |||||||| || || ||||||||| Sbjct 145450 TGCATCTTCCAGCGTTTCGCGGCGCAGAACGTTGACGTTCAGATGCTGTCCACCTTCA 145507 >seq2 Length=722220 Score = 131 bits (144), Expect = 2e-25 Identities = 131/170 (77%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 126791 GTAAAGGTACGAGCGATAACATCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 126850 || ||||| || | || ||||| ||||||| || |||||| ||||||||||| || Sbjct 515059 GTGAAGGTTCGGGTAATCACATCCTGCTGCTGCTCTTTAGTCAGTGAGTTAAAGCGCACA 515118 Query 126851 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 126910 || |||||||| || || |||||||| ||||||||||| || ||||| | | ||||| Sbjct 515119 GCGTAACCGGAAACGCGAATGGTCAGTTGCGGATATTTCTCTGGATGTTCCATCGCATCC 515178 Query 126911 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTC 126960 ||| ||||||| || |||||||||||| ||||| ||||| ||||| Sbjct 515179 AGCAGCATTTCACGGTTCATAACGTTAACGTTGAGGTGCTGACCGCCTTC 515228 >seq1 Length=970878 Score = 122 bits (134), Expect = 9e-23 Identities = 269/401 (67%), Gaps = 2/401 (0%) Strand=Plus/Plus Query 38199 TTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTT 38258 || || || |||||||| ||||| ||||| | |||||| |||| || || ||| || Sbjct 158273 TTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACCACGGTTGTTC 158332 Query 38259 TTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATA-AGCAGTAGCAGC 38317 |||| || || || |||| | ||||| |||||| || || || | ||| || || || Sbjct 158333 TTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAGC-GTGGCTGC 158391 Query 38318 GCCGCCACGAATTCCGCCCTGTGAACATGAGTTAACTGCAGCCTGAAAATGTTTCCAAAA 38377 ||||||||||| |||||||| ||||| || || || || | ||| ||||| || | || Sbjct 158392 GCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAATGCTTGTAGAA 158451 Query 38378 AGGAATAACACCAGGATGGCATACATCACCCATGCCAATCTCAGAACCTTCGGCACGAAT 38437 || ||| || | |||| | | ||||| || |||| || ||||| || Sbjct 158452 CGGGATACAGCCGGTATGGAACGCTTCACCGCCGCGAATCGGGCTGCCCAGCGCACGGAT 158511 Query 38438 CATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCGGA 38497 ||| |||| ||||| || || || || | ||||| ||||| ||||||| ||| Sbjct 158512 ACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTTCACAATTGCGCTGGA 158571 Query 38498 AGCCTTATTGATAGACTTCAATGAATCACCTGCCTCAATAACAACACATGAACTAAACTG 38557 | ||||| || | || || || ||| || | ||||| || || ||||| Sbjct 158572 GGTGGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGCACACAGGAGCTGAACTG 158631 Query 38558 TCGAGTCGGAGTACGGCAACCAGCCATAATAGGAGTTGGCA 38598 || || || || || |||| ||| || || || |||| Sbjct 158632 ACGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCA 158672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540606557533720