Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031019.1 Length=41809 Score E Sequences producing significant alignments: (Bits) Value seq1 352 8e-93 >seq1 Length=970878 Score = 352 bits (390), Expect = 8e-93 Identities = 665/973 (68%), Gaps = 4/973 (0%) Strand=Plus/Plus Query 29115 AGGCCGCTGTTTGGTTTCTATGTAAATTCTACCAATATATTCTCCAAGAATACCTATTCC 29174 ||| || | ||||||||| |||||||| | || |||||||| || || | || || || Sbjct 786016 AGGACGATTTTTGGTTTCCATGTAAATGCGGCCGATATATTCACCCAGCACGCCAATCCC 786075 Query 29175 TATCAATTGAACGCCACCCAGGAAAAGAACAGAAACAAGAAGAGACGGGTAGCCAGGAAC 29234 || | ||||||||||| || || || || ||||| |||| ||| |||||||| || || Sbjct 786076 AATAAGCTGAACGCCACCAAGAAACAGCACGGAAACCAGAATAGAGGGGTAGCCTGGCAC 786135 Query 29235 ATTATTTCCAAATATTAATTTATCAATAATCATCCATGCACCGTAAAGGAATGACATACC 29294 || ||||| | || ||||| | |||||||| || || || || | | Sbjct 786136 CGGGTTACCAAACAGCAACTTATCCAGGATCATCCAGAGTCCATATAGAAAAGCTAGCGA 786195 Query 29295 TGCAATAAACAATCCAATGTAAGTCCATATGCGGAGCGGAAATGTTGAGAAAGAAGTTAT 29354 || | | || || | || | ||| ||||| || |||| || ||||| || || | Sbjct 786196 GGCCACCAGAAAACCCAGATATGACCAGATGCGAAGTGGAACCGTAGAGAATGAGGTCAG 786255 Query 29355 TCCCTCCAGCGCCAGGTTCCATAATTTCCAGCCGTTGAATTTCGAATCACCGGCCACGCG 29414 |||||||||||| || ||||| | ||||||||| |||||| | || || | || Sbjct 786256 TCCCTCCAGCGCAAGATTCCACAGCTTCCAGCCGCCGAATTTACTGTGGCCCGCGATCCG 786315 Query 29415 TTCGGCACGGGCATATTTAACAACATCCGTTTTTCCGCCAACCCAACTGAGCACACCCTT 29474 || | ||| |||||| || | ||| || |||||||| |||||||| || | ||||| Sbjct 786316 CTCAGTACGCACATATTCTACGATATCAGTCTTTCCGCCGACCCAACTCAGAATCCCCTT 786375 Query 29475 CATAAACAAGTTGCGTTCTGGCATTTGTTTGATGTTCTCGACAACCGCACGGCTCATTAA 29534 |||||| | || || |||| | || || ||||||||||| |||| ||| | Sbjct 786376 CATAAAGAGATTCTTCTCGGGCAGCAGCTTAATATTCTCGACAACTTCACGCGACATCAG 786435 Query 29535 CCGAAAGTCGCCAACATTTTCTTCGATTTTTGGATTGCTGATTTTATTGTGCAGCTTATA 29594 ||| || || || ||||| ||||| || | |||| |||||| | || ||||| || || Sbjct 786436 CCGGAAATCACCGACATTCTCTTCTATCTGCGGATGGCTGATGCTGTTATGCAGTTTGTA 786495 Query 29595 AAACCACTCAGCTGTCTTACGCTTCATGCGCCCGTCAGTTGAGCGGTCTGAGCGCTTAGC 29654 |||||| || || || || || | | | || || | | ||| ||||| || Sbjct 786496 AAACCAGCGGGCGGTTTTGCGTTTGAGGTGGCCATCGGCACTTCTGTCCATCCGCTTGGC 786555 Query 29655 CAGCACCATATCCGCGCCAGCCTGCCACTTCTCAATGAGATGAGGGATAACTTCTATCGG 29714 || || ||||| || || ||| ||||||| | || | | ||||||||| || || Sbjct 786556 AAGAACAATATCAGCACCCGCCAGCCACTTGTTGATCATCTCAGGGATAACAGTGATGGG 786615 Query 29715 ATCCTGTAAATCGACATCAATAGGAATGACCGCATCCCCGGTTGCATGGTCGAGACCCGC 29774 ||||||||||| |||||||| || || || ||||| |||||||| || || || || Sbjct 786616 GTCCTGTAAATCCACATCAATCGGGATAACGGCATCGCCGGTTGCGGCTTCCAGGCCGGC 786675 Query 29775 GAAAAGAGCAGGTTCTTTACCGAAGTTTCGCGTAAACGAAAGCGGAATAACGAGCGGATC 29834 || || || ||||| || ||||| || || ||||||| || || || |||||||| Sbjct 786676 AAACAGCGCGGGTTCCTTGCCGAAATTACGAATAAACGACAGGCTAAGTACCAGCGGATC 786735 Query 29835 AGATGCAGCT-ATTTTGTTAATTATTGATTCAGTCGCATCTTTACTACCATCATTAATAA 29893 | | || | || | |||| | | | || |||||| | || ||||||| || || Sbjct 786736 -GCTCTGACTCAGTTGGGTAATCAGCGCATGCGTTGCATCTGTGCTGCCATCATCAACAA 786794 Query 29894 AAACGATCTCAATTTCATATTCTTTTAGCTCATTAAACTCACGTACCGTTTTATAGAAAA 29953 |||| ||||||| | | || ||| | | | | | | |||| | ||| |||| Sbjct 786795 AAACAATCTCAACCTGCCAGGCTGCCAGCGCTTCATATTTTCTGACCGCGTCATAAAAAA 786854 Query 29954 TCGGTATCGTGTCTTCTTCGTTAAAAACTGGAACGACAAGAGAGATTTTCATCTTATATC 30013 || || || ||||| ||||| || || || || |||||||||||||| | | || Sbjct 786855 GAGGGATGACCTCCTCTTCATTAAATACCGGTACCACCAGAGAGATTTTCAT-TATTCTC 786913 Query 30014 CCTGAAA-ACAATGAATCTGGAATAGATAAAGCCGCATACCAGGCTAATTGCCGAGAAAG 30072 | | ||| || || || | |||| | | |||||| || |||| || || ||||| | | Sbjct 786914 CTTTAAATACGATAAAGCGGGAAAAAAGAAAGCCACACGCCAGACTGATAGCCGATGAGG 786973 Query 30073 TGATAAGGGTAAT 30085 |||| || ||||| Sbjct 786974 TGATCAGCGTAAT 786986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133657090499038