Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031030.1 Length=170788 Score E Sequences producing significant alignments: (Bits) Value seq13 127 2e-24 seq1 118 1e-21 seq2 93.3 5e-14 seq795 82.4 8e-11 >seq13 Length=199142 Score = 127 bits (140), Expect = 2e-24 Identities = 105/128 (82%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 60722 GTGAATGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 60781 || || ||||| | || |||||||||||||| || || || || |||||||| || || Sbjct 145337 GTAAAGGTACGGGTAATCACGTCGCGCTGCTGCTCAGGCGTGAGTGAGTTAAAACGCACG 145396 Query 60782 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 60841 ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||||| Sbjct 145397 GCATAGCCTGAAACGCGGATAGTCAGCTGCGGATAGTTTTCAGGATGTTTAACTGCATCT 145456 Query 60842 TCCAGAGT 60849 ||||| || Sbjct 145457 TCCAGCGT 145464 >seq1 Length=970878 Score = 118 bits (130), Expect = 1e-21 Identities = 293/440 (67%), Gaps = 6/440 (1%) Strand=Plus/Plus Query 139476 TTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTT 139535 || || || |||||||| ||||| ||||| | |||||| |||| || || ||| || Sbjct 158273 TTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACCACGGTTGTTC 158332 Query 139536 TTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATA-AGCAGTAGCAGC 139594 |||| || || || |||| | ||||| |||||| || || || | ||| || || || Sbjct 158333 TTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAGC-GTGGCTGC 158391 Query 139595 GCCGCCACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAA 139654 ||||||||||| || ||||| ||||| || || || || ||||| ||||| || | || Sbjct 158392 GCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAATGCTTGTAGAA 158451 Query 139655 AGGAATAACACCAGTATG--ACGTACTTCACCCATGCCAATTTTAGAACCTTCAGCACGA 139712 || ||| || ||||| ||| ||||||| || ||| || ||||| Sbjct 158452 CGGGATACAGCCGGTATGGAACG--CTTCACCGCCGCGAATCGGGCTGCCCAGCGCACGG 158509 Query 139713 ATCATACCAACATTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCG 139772 || ||| | || ||||| || || || || | ||||| ||||| ||||||| | Sbjct 158510 ATACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTTCACAATTGCGCTG 158569 Query 139773 GAAGCCTTATTGATAGACTTCAATGAATCTCCTGCCTCAATAACGACGCATGAACTAAAC 139832 || | ||||| || | || || || ||| || | || || || || ||| Sbjct 158570 GAGGTGGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGCACACAGGAGCTGAAC 158629 Query 139833 TGCCGAGTTGGAGTACGACAGCCAGCCATAATAGGAGTTGGTAATGAAATCTGTCGAGTA 139892 || || ||||| || || ||||| ||| || || || || | || || | || Sbjct 158630 TGACGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCAGGGAGATTTTAAACGTC 158689 Query 139893 GATACCGCTTCATAAAAACG 139912 || | ||| ||||| ||||| Sbjct 158690 GAGATCGCATCATAGAAACG 158709 Score = 86.0 bits (94), Expect = 7e-12 Identities = 80/99 (81%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 68826 TGCATGGATTCGAACCATGGACCAATTGATTAACAGTCAACTGCTCTACC-ACTGAGCTA 68884 |||| ||||||||||| |||||||||||||| |||||||||||||||| ||||||||| Sbjct 124 TGCA-GGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCAACTGAGCTA 182 Query 68885 CACATCCAAATTGGTGGGGAGTGATGGAGTCGAACCACC 68923 | || || ||||||| ||| || ||||||| || Sbjct 183 ACGACCCGAAGTGGTGGGTGATGACGGGTTCGAACCGCC 221 >seq2 Length=722220 Score = 93.3 bits (102), Expect = 5e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 60718 CTTGGTGAATGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCG 60777 ||| ||||| || || | || || || ||||||| || |||||| ||||||||||| Sbjct 515055 CTTAGTGAAGGTTCGGGTAATCACATCCTGCTGCTGCTCTTTAGTCAGTGAGTTAAAGCG 515114 Query 60778 AACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 60828 || || |||||||| || || |||||||| ||||||||||| || ||||| Sbjct 515115 CACAGCGTAACCGGAAACGCGAATGGTCAGTTGCGGATATTTCTCTGGATG 515165 >seq795 Length=5257 Score = 82.4 bits (90), Expect = 8e-11 Identities = 89/114 (78%), Gaps = 7/114 (6%) Strand=Plus/Minus Query 69864 GCGCTCTACCAAACTGAGCTACACGGAGTAAATTAAATTGGAGCGGATAATGAGAATCGA 69923 |||||||||||| |||||| | | || | || |||||||| | | ||||||| Sbjct 4406 GCGCTCTACCAA-CTGAGCCATATC-AGCACATC----TGGAGCGGGCAGCGGGAATCGA 4353 Query 69924 ACTCACATCATCAGATTGGAAGTCTGAGGTAAT-GCCATTATACGATATCCGCA 69976 || | ||||||||| ||||||| |||||||||| ||||||||||||| ||||| Sbjct 4352 ACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGCA 4299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546350100239520