Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031045.1 Length=157855 Score E Sequences producing significant alignments: (Bits) Value seq4 104 2e-17 seq1 100 3e-16 >seq4 Length=447486 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19040 TGGCCCCGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 19099 ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 299225 TGGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAA 299284 Query 19100 TCCAGCCAGGGTCACCA 19116 ||||| ||| ||||| Sbjct 299285 CCCAGCAGGGGCCACCA 299301 >seq1 Length=970878 Score = 100 bits (110), Expect = 3e-16 Identities = 286/434 (66%), Gaps = 12/434 (3%) Strand=Plus/Plus Query 91511 TTCACCAGGCGCTCGAACATGACGCGGTTAATCTGAATCCCATAGTCGATACGGCGTTCA 91570 |||| |||||||| |||| | ||| | ||| | |||||||| || | || | Sbjct 158246 TTCAGCAGGCGCTGATACATCAGCTTGTTGAGCTGTACACCATAGTCCATGTGACGCACG 158305 Query 91571 CGGTTCTCTTCCAATCCACGGTTGTTTTTGAGAACAACGACATCATCAAATTGATAATGC 91630 ||||| |||| | ||||||||||| || || || | | || | || |||| Sbjct 158306 CGGTTGCCTTCAACACCACGGTTGTTCTTCAGCACCAGCAGGCTTTCGATTTCCAGATGC 158365 Query 91631 CAGATGGG--AACATAGCATGTTGCCGATCCACCACGGATACCGCCTTGAGAGCAAGACT 91688 || || || | | ||| || || | || ||||| | ||||| ||||| || |||| Sbjct 158366 CACATCGGGTAGAACAGCGTG--GCTGCGCCGCCACGAACGCCGCCCTGAGAACAGGACT 158423 Query 91689 TCAGGGCACCAGTC---AAATACTTGATGAATGGAAC-CAGACCTGTATGGACCATTTCC 91744 ||| || ||| |||| |||| ||| || | ||| || ||||||| | ||| Sbjct 158424 TCACCGCG---GTCTGGAAATGCTTGTAGAACGGGATACAG-CCGGTATGGAACGCTTCA 158479 Query 91745 CCTTTACGGATAGGGCTACCGATGCCACGAATTGCCCCAACATCGAATCCGATGCCAGCA 91804 || || || ||||| || | |||| || || | | || |||||||| ||| Sbjct 158480 CCGCCGCGAATCGGGCTGCCCAGCGCACGGATACGACCGGCGTTGATACCGATGCCGGCA 158539 Query 91805 CGTTTGGAAACATAATCCACGATGCTTTTCGCAGTGGCATTAATTGAGTCCAATGTGTCA 91864 || | || ||||| | ||| || | | ||||| || || ||||||| |||| Sbjct 158540 CGCTGAGAGACATATTTCACAATTGCGCTGGAGGTGGCGTTGATGGAGTCCAGGCTGTCG 158599 Query 91865 CCAGTTTTGATCAATACACAAGAGCTGAACTGTCGGGTCGGGGTGCGGACGCCGGACATA 91924 || | ||||| ||||| ||||||||||| || || |||||||| ||||| ||||| Sbjct 158600 CCGCACTCGATCAGCACACAGGAGCTGAACTGACGTGTTGGGGTGCGTACGCCAGACATG 158659 Query 91925 ATAGGTGTTGGAAG 91938 || || || || || Sbjct 158660 ATTGGCGTCGGCAG 158673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504967795050600